Research Groups

2019

Angelina S Gross, Andreas Zimmermann, Tobias Pendl, Sabrina Schroeder, Hannes Schoenlechner, Oskar Knittelfelder, Laura Lamplmayr, Ana Santiso, Andreas Aufschnaiter, Daniel Waltenstorfer, Sandra Ortonobes Lara, Sarah Stryeck, Christina Kast, Christoph Ruckenstuhl, Sebastian J Hofer, Birgit Michelitsch, Martina Woelflingseder, Rolf Müller, Didac Carmona-Gutierrez, Tobias Madl, Sabrina Büttner, Kai-Uwe Fröhlich, Andrej Shevchenko, Tobias Eisenberg
Acetyl-CoA carboxylase 1-dependent lipogenesis promotes autophagy downstream of AMPK.
J Biol Chem, 294(32) 12020-12039 (2019)
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Eugenia Marbach-Breitrück, Madlen Matz-Soja, Ute Abraham, Wolfgang Schmidt-Heck, Susanne Sales, Christiane Rennert, Matthias Kern, Susanne Aleithe, Luise Spormann, Carlo Thiel, Raffaele Gerlini, Katrin Arnold, Nora Klöting, Reinhard Guthke, Damjana Rozman, Raffaele Teperino, Andrej Shevchenko, Achim Kramer, Rolf Gebhardt
Tick-tock hedgehog-mutual crosstalk with liver circadian clock promotes liver steatosis.
J Hepatol, 70(6) 1192-1202 (2019)
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Albert Thommen, Steffen Werner, Olga Frank, Jenny Philipp, Oskar Knittelfelder, Yihui Quek, Karim Fahmy, Andrej Shevchenko, Benjamin Friedrich, Frank Jülicher, Jochen Rink
Body size-dependent energy storage causes Kleiber's law scaling of the metabolic rate in planarians.
Elife, 8 Art. No. e38187 (2019)

2018

Anna Shevchenko, Andrea Schuhmann, Henrik Thomas, Günter Wetzel
Fine Endmesolithic fish caviar meal discovered by proteomics in foodcrusts from archaeological site Friesack 4 (Brandenburg, Germany).
PLoS ONE, 13(11) Art. No. e0206483 (2018)
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Bo Burla, Makoto Arita, Masanori Arita, Anne K Bendt, Amaury Cazenave-Gassiot, Edward A Dennis, Kim Ekroos, Xianlin Han, Kazutaka Ikeda, Gerhard Liebisch, Michelle I Lin, Tze Ping Loh, Peter J Meikle, Matej Orešič, Oswald Quehenberger, Andrej Shevchenko, Federico Torta, Michael J O Wakelam, Craig E Wheelock, Markus R Wenk
MS-based lipidomics of human blood plasma: a community-initiated position paper to develop accepted guidelines.
J Lipid Res, 59(10) 2001-2017 (2018)
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Marko Brankatschk, Theresia Gutmann, Oskar Knittelfelder, Alessandra Palladini, Elodie Prince, Michal Grzybek, Beate Brankatschk, Andrej Shevchenko, Ünal Coskun, Suzanne Eaton
A Temperature-Dependent Switch in Feeding Preference Improves Drosophila Development and Survival in the Cold
Dev Cell, 46(6) 781-793 (2018)
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Maria Kotini, Elias H Barriga, Jonathan Leslie, Marc Gentzel, Verena Rauschenberger, Alexandra Schambon, Roberto Mayor
Gap junction protein Connexin-43 is a direct transcriptional regulator of N-cadherin in vivo.
Nat Commun, 9(1) Art. No. 3846 (2018)
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Christiane Rennert, Sebastian Vlaic, Eugenia Marbach-Breitrück, Carlo Thiel, Susanne Sales, Andrej Shevchenko, Rolf Gebhardt, Madlen Matz-Soja
The Diurnal Timing of Starvation Differently Impacts Murine Hepatic Gene Expression and Lipid Metabolism - A Systems Biology Analysis Using Self-Organizing Maps.
Front Physiol, 9 Art. No. 1180 (2018)
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Oskar Knittelfelder, Sofia Traikov, Olga Vvedenskaya, Andrea Schuhmann, Sandra Segeletz, Anna Shevchenko, Andrej Shevchenko
Shotgun Lipidomics Combined with Laser Capture Microdissection: A Tool To Analyze Histological Zones in Cryosections of Tissues.
Anal Chem, 90(16) 9868-9878 (2018)
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Elena Bonzón-Kulichenko, Eduardo Moltó, Cristina Pintado, Alejandro Fernández, Carmen Arribas, Dominik Schwudke, Nilda Gallardo, Andrej Shevchenko, Antonio Andrés
Changes in Visceral Adipose Tissue Plasma Membrane Lipid Composition in Old Rats Are Associated With Adipocyte Hypertrophy With Aging.
J Gerontol A Biol Sci Med Sci, 73(9) 1139-1146 (2018)
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Dominic B Bernkopf, Kowcee Jalal, Martina Brückner, Karl X Knaup, Marc Gentzel, Alexandra Schambony, Jürgen Behrens
Pgam5 released from damaged mitochondria induces mitochondrial biogenesis via Wnt signaling.
J Cell Biol, 217(4) 1383-1394 (2018)
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Patrick Rockenfeller, Martin Smolnig, Jutta Diessl, Mina Bashir, Vera Schmiedhofer, Oskar Knittelfelder, Julia Ring, Joakim Franz, Ines Foessl, M Khan, René Rost, Wolfgang F Graier, Guido Kroemer, Andreas Zimmermann, Didac Carmona-Gutierrez, Tobias Eisenberg, Sabrina Büttner, Stephan J Sigrist, Ronald P Kühnlein, Sepp D Kohlwein, Campbell W Gourlay, Frank Madeo
Diacylglycerol triggers Rim101 pathway-dependent necrosis in yeast: a model for lipotoxicity.
Cell Death Differ, 25(4) 765-781 (2018)
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Santosh Phuyal, Mayes Kasem, Oskar Knittelfelder, Animesh Sharma, Davi de Miranda Fonseca, Vaineta Vebraite, Sergey Shaposhnikov, Geir Slupphaug, Vidar Skaug, Shanbeh Zienolddiny
Characterization of the proteome and lipidome profiles of human lung cells after low dose and chronic exposure to multiwalled carbon nanotubes.
Nanotoxicology, 12(2) 138-152 (2018)
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Mukesh Kumar, Shai Joseph, Martina Augsburg, Aliona Bogdanova, David N. Drechsel, Nadine Vastenhouw, Frank Buchholz, Marc Gentzel, Andrej Shevchenko
MS Western, a Method of Multiplexed Absolute Protein Quantification is a Practical Alternative to Western Blotting.
Mol Cell Proteomics, 17(2) 384-396 (2018)
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Olga Vvedenskaya, Yuting Wang, Jacobo Miranda Ackerman, Oskar Knittelfelder, Andrej Shevchenko
Analytical challenges in human plasma lipidomics: A winding path towards the truth
Trends Analyt Chem, Art. No. doi: 10.1016/j.trac.2018.10.013 (2018)

2017

Sunyoung Hwang, H Tobias Gustafsson, Ciara O'Sullivan, Gianna Bisceglia, Xinhe Huang, Christian Klose, Andrej Shevchenko, Robert C Dickson, Paola Cavaliere, Noah Dephoure, Eduardo M Torres
Serine-Dependent Sphingolipid Synthesis Is a Metabolic Liability of Aneuploid Cells.
Cell Rep, 21(13) 3807-3818 (2017)
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Kai Schuhmann, Kristina Srzentić, Konstantin O Nagornov, Henrik Thomas, Theresia Gutmann, Ünal Coskun, Yury O Tsybin, Andrej Shevchenko
Monitoring Membrane Lipidome Turnover by Metabolic 15N Labeling and Shotgun Ultra-High-Resolution Orbitrap Fourier Transform Mass Spectrometry.
Anal Chem, 89(23) 12857-12865 (2017)
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John A Bowden, Alan Heckert, Candice Z Ulmer, Christina M Jones, Jeremy P Koelmel, Laila Abdullah, Linda Ahonen, Yazen Alnouti, Aaron Armando, John M Asara, Takeshi Bamba, John R Barr, Jonas Bergquist, Christoph H Borchers, Joost Brandsma, Susanne B Breitkopf, Tomas Cajka, Amaury Cazenave-Gassiot, Antonio Checa, Michelle A Cinel, Romain A Colas, Serge Cremers, Edward A Dennis, James E Evans, Alexander Fauland, Oliver Fiehn, Michael S Gardner, Timothy J Garrett, Katherine H Gotlinger, Jun Han, Yingying Huang, Aveline Huipeng Neo, Tuulia Hyötyläinen, Yoshihiro Izumi, Hongfeng Jiang, Houli Jiang, Jiang Jiang, Maureen Kachman, Reiko Kiyonami, Kristaps Klavins, Christian Klose, Harald C Köfeler, Johan Kolmert, Therese Koal, Grielof Koster, Zsuzsanna Kuklenyik, Irwin J Kurland, Michael Leadley, Karen Lin, Krishna Rao Maddipati, Danielle McDougall, Peter J Meikle, Natalie A Mellett, Cian Monnin, M Arthur Moseley, Renu Nandakumar, Matej Oresic, Rainey Patterson, David Peake, Jason S Pierce, Martin Post, Anthony D Postle, Rebecca Pugh, Yunping Qiu, Oswald Quehenberger, Parsram Ramrup, Jon Rees, Barbara Rembiesa, Denis Reynaud, Mary R Roth, Susanne Sales, Kai Schuhmann, Michal Laniado Schwartzman, Charles N Serhan, Andrej Shevchenko, Stephen E Somerville, Lisa St John-Williams, Michal Surma, Hiroyuki Takeda, Rhishikesh Thakare, J Will Thompson, Federico Torta, Alexander Triebl, Martin Trötzmüller, S J Kumari Ubhayasekera, Dajana Vuckovic, Jacquelyn M Weir, Ruth Welti, Markus R Wenk, Craig E Wheelock, Libin Yao, Min Yuan, Xueqing Heather Zhao, Senlin Zhou
Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950-Metabolites in Frozen Human Plasma.
J Lipid Res, 58(12) 2275-2288 (2017)
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Dominik Schwudke, Andrej Shevchenko, N Hoffmann, R Ahrends
Lipidomics informatics for life-science.
J Biotechnol, 261 131-136 (2017)
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Mihaela Anitei, Christoph Stange, Cornelia Czupalla, Christian Niehage, Kai Schuhmann, Pia Sala, Aleksander Czogalla, Theresia Pursche, Ünal Coskun, Andrej Shevchenko, Bernard Hoflack
Spatiotemporal Control of Lipid Conversion, Actin-Based Mechanical Forces, and Curvature Sensors during Clathrin/AP-1-Coated Vesicle Biogenesis.
Cell Rep, 20(9) 2087-2099 (2017)
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Kai Schuhmann, Henrik Thomas, Jacobo Miranda Ackerman, Konstantin O Nagornov, Yury O Tsybin, Andrej Shevchenko
Intensity-Independent Noise Filtering in FT MS and FT MS/MS Spectra for Shotgun Lipidomics.
Anal Chem, 89(13) 7046-7052 (2017)
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Verena Rauschenberger, Dominic B Bernkopf, Sabrina Krenn, Kowcee Jalal, Jens Heller, Jürgen Behrens, Marc Gentzel, Alexandra Schambony
The phosphatase Pgam5 antagonizes Wnt/β-Catenin signaling in embryonic anterior-posterior axis patterning.
Development, 144(12) 2234-2247 (2017)
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Carlos Ocaña-Morgner, Susanne Sales, Manuela Rothe, Andrej Shevchenko, Rolf Jessberger
Tolerogenic versus Immunogenic Lipidomic Profiles of CD11c(+) Immune Cells and Control of Immunogenic Dendritic Cell Ceramide Dynamics.
J Immunol, 198(11) 4360-4372 (2017)
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Julia Sellin, Heike Schulze, Marie Paradis, Dominic Gosejacob, Cyrus Papan, Andrej Shevchenko, Olympia Ekaterina Psathaki, Achim Paululat, Melanie Thielisch, Konrad Sandhoff, Michael Hoch
Characterization of Drosophila Saposin-related mutants as a model for lysosomal sphingolipid storage diseases.
Dis Model Mech, 10(6) 737-750 (2017)
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Mesut Bilgin, Andrej Shevchenko
Quantification of endogenous endocannabinoids by LC-MS/MS
In: Lipidomics. (Eds.) Paul Wood (Neuromethods ; 125).,New York,Springer (2017),99-107 Ch. 7
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Shai Joseph, Máté Pálfy, Lennart Hilbert, Mukesh Kumar, Jens Karschau, Vasily Zaburdaev, Andrej Shevchenko, Nadine Vastenhouw
Competition between histone and transcription factor binding regulates the onset of transcription in zebrafish embryos.
Elife, 6 Art. No. e23326 (2017)
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Ines Wagner, Heng Wang, Philipp M Weissert, Werner L Straube, Anna Shevchenko, Marc Gentzel, Goncalo Brito, Akira Tazaki, Catarina Oliveira, Takuji Sugiura, Andrej Shevchenko, András Simon, David N. Drechsel, Elly M. Tanaka
Serum Proteases Potentiate BMP-Induced Cell Cycle Re-entry of Dedifferentiating Muscle Cells during Newt Limb Regeneration.
Dev Cell, 40(6) 608-617 (2017)
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Sara Ciucci, Yan Ge, Claudio Durán, Alessandra Palladini, Víctor Jiménez-Jiménez, Luisa María Martínez-Sánchez, Yuting Wang, Susanne Sales, Andrej Shevchenko, Steven W Poser, Maik Herbig, Oliver Otto, Andreas Androutsellis-Theotokis, Jochen Guck, Mathias J. Gerl, Carlo Vittorio Cannistraci
Enlightening discriminative network functional modules behind Principal Component Analysis separation in differential-omic science studies.
Sci Rep, 7 Art. No. 43946 (2017)
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Anna Shevchenko, Yimin Yang, Andrea Knaust, Jean-Marc Verbavatz, Huijuan Mai, Bo Wang, Changsui Wang, Andrej Shevchenko
Open sesame: Identification of sesame oil and oil soot ink in organic deposits of Tang Dynasty lamps from Astana necropolis in China.
PLoS ONE, 12(2) Art. No. e0158636 (2017)
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Susanne Sales, Oskar Knittelfelder, Andrej Shevchenko
Lipidomics of Human Blood Plasma by High-Resolution Shotgun Mass Spectrometry.
Methods Mol Biol, 1619 203-212 (2017)

2016

Mingsi Xie, Anna Shevchenko, Binghua Wang, Andrej Shevchenko, Changsui Wang, Yimin Yang
Identification of a dairy product in the grass woven basket from Gumugou Cemetery (3800 BP, northwestern China)
Quat Int, 426 158-165 (2016)
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S Kopprasch, Srirangan Dheban, Kai Schuhmann, Aimin Xu, K-M Schulte, Charmaine J Simeonovic, Peter E H Schwarz, Stefan Bornstein, Andrej Shevchenko, Juergen Graessler
Detection of Independent Associations of Plasma Lipidomic Parameters with Insulin Sensitivity Indices Using Data Mining Methodology.
PLoS ONE, 11(10) Art. No. e0164173 (2016)
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Yin Ning Chiang, Kah Junn Tan, Henry Chung, Oksana Lavrynenko, Andrej Shevchenko, Joanne Y Yew
Steroid Hormone Signaling Is Essential for Pheromone Production and Oenocyte Survival.
PLoS Genet, 12(6) Art. No. e1006126 (2016)
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Alexander Kotzsch, Damian Pawolski, Alexander Milentyev, Anna Shevchenko, André Scheffel, Nicole Poulsen, Andrej Shevchenko, Nils Kröger
Biochemical Composition and Assembly of Biosilica-associated Insoluble Organic Matrices from the Diatom Thalassiosira pseudonana.
J Biol Chem, 291(10) 4982-4997 (2016)
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Sophie Ayciriex, Hermeto Gerber, Guillermo M Garcia Osuna, Mohamed Chami, Henning Stahlberg, Andrej Shevchenko, Patrick C Fraering
The lipidome associated with the γ-secretase complex is required for its integrity and activity.
Biochem J, 473(3) 321-334 (2016)
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Mesut Bilgin, Petra Born, Filomena Fezza, Michael Heimes, Nicolina Mastrangelo, Nicolai Wagner, Carsten Schultz, Mauro Maccarrone, Suzanne Eaton, André Nadler, Matthias Wilm, Andrej Shevchenko
Lipid Discovery by Combinatorial Screening and Untargeted LC-MS/MS.
Sci Rep, 6 Art. No. 27920 (2016)
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Susanne Sales, Juergen Graessler, Sara Ciucci, Rania Al-Atrib, Terhi Vihervaara, Kai Schuhmann, Dimple Kauhanen, Marko Sysi-Aho, Stefan Bornstein, Marc Bickle, Carlo Vittorio Cannistraci, Kim Ekroos, Andrej Shevchenko
Gender, Contraceptives and Individual Metabolic Predisposition Shape a Healthy Plasma Lipidome.
Sci Rep, 6 Art. No. 27710 (2016)

2015

Sarita Hebbar, Ishtapran Sahoo, Artur Matysik, Irene Argudo Garcia, Kathleen Amy Osborne, Cyrus Papan, Federico Torta, Pradeep Narayanaswamy, Xiu Hui Fun, Markus R Wenk, Andrej Shevchenko, Dominik Schwudke, Rachel Kraut
Ceramides And Stress Signalling Intersect With Autophagic Defects In Neurodegenerative Drosophila blue cheese (bchs) Mutants.
Sci Rep, 5 Art. No. 15926 (2015)
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Oksana Lavrynenko, Jonathan Rodenfels, Maria Carvalho, Natalie Dye, Rene Lafont, Suzanne Eaton, Andrej Shevchenko
The ecdysteroidome of Drosophila: influence of diet and development.
Development, 142(21) 3758-3768 (2015)
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James Sáenz, Daniel Grosser, Alexander S Bradley, Thibaut Lagny, Oksana Lavrynenko, Martyna Broda, Kai Simons
Hopanoids as functional analogues of cholesterol in bacterial membranes.
Proc Natl Acad Sci U.S.A., 112(38) 11971-11976 (2015)
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Jan Böttger, Katrin Arnold, Carlo Thiel, Christiane Rennert, Susanne Aleithe, Ute Hofmann, Sebastian Vlaic, Susanne Sales, Andrej Shevchenko, Madlen Matz-Soja
RNAi in murine hepatocytes: the agony of choice-a study of the influence of lipid-based transfection reagents on hepatocyte metabolism.
Arch Toxicol, 89(9) 1579-1588 (2015)
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Mesut Bilgin, Laura Bindila, Juergen Graessler, Andrej Shevchenko
Quantitative profiling of endocannabinoids in lipoproteins by LC-MS/MS.
Anal Bioanal Chem, 407(17) 5125-5131 (2015)
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Anja Zeigerer, Roman L Bogorad, Kirti Sharma, Jerome Gilleron, Sarah Seifert, Susanne Sales, Nikolaus Berndt, Sascha Bulik, Giovanni Marsico, Rochelle C J D'Souza, Naharajan Lakshmanaperumal, Kesavan Meganathan, Karthick Natarajan, Agapios Sachinidis, Andreas Dahl, Hermann-Georg Holzhütter, Andrej Shevchenko, Matthias Mann, Victor Koteliansky, Marino Zerial
Regulation of Liver Metabolism by the Endosomal GTPase Rab5.
Cell Rep, 11(6) 884-892 (2015)
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Juergen Graessler, Kai Schuhmann, Andrej Shevchenko, S Kopprasch, Ryan Ban, S Bergmann, Stefan Bornstein, Bernd Hohenstein, U Julius
Increasing plasma lysophosphatidylcholine levels in patients with regular dextran sulfate lipoprotein apheresis.
Atheroscler Suppl, 18 170-175 (2015)
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Helena Khaliullina, Mesut Bilgin, Julio Sampaio, Andrej Shevchenko, Suzanne Eaton
Endocannabinoids are conserved inhibitors of the Hedgehog pathway.
Proc Natl Acad Sci U.S.A., 112(11) 3415-3420 (2015)
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Marc Gentzel, Carolin Schille, Verena Rauschenberger, Alexandra Schambony
Distinct functionality of dishevelled isoforms on Ca2+/calmodulin-dependent protein kinase 2 (CamKII) in Xenopus gastrulation.
Mol Biol Cell, 26(5) 966-977 (2015)
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Michael Habeck, Haim Haviv, Adriana Katz, Einat Kapri-Pardes, Sophie Ayciriex, Andrej Shevchenko, Haruo Ogawa, Chikashi Toyoshima, Steven J D Karlish
Stimulation, Inhibition, or Stabilization of Na,K-ATPase Caused by Specific Lipid Interactions at Distinct Sites.
J Biol Chem, 290(8) 4829-4842 (2015)
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Cai Guo, Akiko Kumagai, Katharina Schlacher, Anna Shevchenko, Andrej Shevchenko, William G Dunphy
Interaction of Chk1 with Treslin negatively regulates the initiation of chromosomal DNA replication.
Mol Cell, 57(3) 492-505 (2015)
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Arne Schwelm, Johan Fogelqvist, Andrea Knaust, Sabine Jülke, Tua Lilja, German Bonilla-Rosso, Magnus Karlsson, Andrej Shevchenko, Vignesh Dhandapani, Su Ryun Choi, Hong Gi Kim, Ju Young Park, Yong Pyo Lim, Jutta Ludwig-Müller, Christina Dixelius
The Plasmodiophora brassicae genome reveals insights in its life cycle and ancestry of chitin synthases.
Sci Rep, 5 Art. No. 11153 (2015)

2014

Maurice A Itoe, Julio Sampaio, Ghislain G Cabal, Eliana Real, Vanessa Zuzarte-Luis, Sandra March, Sangeeta N Bhatia, Friedrich Frischknecht, Christoph Thiele, Andrej Shevchenko, Maria M Mota
Host cell phosphatidylcholine is a key mediator of malaria parasite survival during liver stage infection.
Cell Host Microbe, 16(6) 778-786 (2014)
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Christine Moessinger, Kristina Klizaite, Almut Steinhagen, Julia Philippou-Massier, Andrej Shevchenko, Michael Hoch, Christer S. Ejsing, Christoph Thiele
Two different pathways of phosphatidylcholine synthesis, the Kennedy Pathway and the Lands Cycle, differentially regulate cellular triacylglycerol storage.
BMC Cell Biol, 15(1) Art. No. 43 (2014)
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Jonathan Rodenfels, Oksana Lavrynenko, Sophie Ayciriex, Julio Sampaio, Maria Carvalho, Andrej Shevchenko, Suzanne Eaton
Production of systemically circulating Hedgehog by the intestine couples nutrition to growth and development.
Genes Dev, 28(23) 2636-2651 (2014)
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Matthias Kern, Joanna Kosacka, Nico Hesselbarth, Julia Brückner, John T Heiker, Gesine Flehmig, Ingrid Klöting, Peter Kovacs, Madlen Matz-Soja, Rolf Gebhardt, Knut Krohn, Susanne Sales, Kerstin Abshagen, Andrej Shevchenko, Michael Stumvoll, Matthias Blüher, Nora Klöting
Liver-restricted repin1 deficiency improves whole-body insulin sensitivity, alters lipid metabolism, and causes secondary changes in adipose tissue in mice.
Diabetes, 63(10) 3295-3309 (2014)
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Anna Shevchenko, Yimin Yang, Andrea Knaust, Henrik Thomas, Hongen Jiang, Enguo Lu, Changsui Wang, Andrej Shevchenko
Proteomics identifies the composition and manufacturing recipe of the 2500-year old sourdough bread from Subeixi cemetery in China.
J Proteomics, 105 363-371 (2014)
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Juergen Graessler, T D Bornstein, D Goel, V P Bhalla, T Lohmann, T Wolf, Manuel Koch, Y Qin, J Licinio, M-L Wong, Trian Chavakis, A Xu, Anna Shevchenko, Kai Schuhmann, P E H Schwarz, K-M Schulte, Avinash Patel, Stefan Bornstein
Lipidomic profiling before and after Roux-en-Y gastric bypass in obese patients with diabetes.
Pharmacogenomics J, 14(3) 201-207 (2014)
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Ramya Lakshminarayan, Christian Wunder, Ulrike Becken, Mark T Howes, Carola Benzing, Senthil Arumugam, Susanne Sales, Nicholas Ariotti, Valérie Chambon, Christophe Lamaze, Damarys Loew, Andrej Shevchenko, Katharina Gaus, Robert G. Parton, Ludger Johannes
Galectin-3 drives glycosphingolipid-dependent biogenesis of clathrin-independent carriers.
Nat Cell Biol, 16(6) 595-606 (2014)
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Yimin Yang, Anna Shevchenko, Andrea Knaust, Idelisi Abuduresule, Wenying Li, Xingjun Hu, Changsui Wang, Andrej Shevchenko
Proteomics evidence for kefir dairy in Early Bronze Age China
J Archaeol Sci, 45 178-186 (2014)
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Cyrus Papan, Sider Penkov, Ronny Herzog, Christoph Thiele, Teymuras V. Kurzchalia, Andrej Shevchenko
Systematic screening for novel lipids by shotgun lipidomics.
Anal Chem, 86(5) 2703-2710 (2014)
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Katharina Seitz, Verena Dürsch, Jakub Harnoš, Vitezslav Bryja, Marc Gentzel, Alexandra Schambony
β-Arrestin interacts with the beta/gamma subunits of trimeric G-proteins and dishevelled in the Wnt/Ca(2+) pathway in xenopus gastrulation.
PLoS ONE, 9(1) Art. No. e87132 (2014)

2013

Cihan Erkut, Andrej Vasilj, Sebastian Boland, Bianca Habermann, Andrej Shevchenko, Teymuras V. Kurzchalia
Molecular Strategies of the Caenorhabditis elegans Dauer Larva to Survive Extreme Desiccation.
PLoS ONE, 8(12) Art. No. e82473 (2013)
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Aniket Ghosh, Tina Kling, Nicolas Snaidero, Julio Sampaio, Andrej Shevchenko, Heribert Gras, Bart Geurten, Martin Göpfert, Jörg B Schulz, Aaron Voigt, Mikael Simons
A Global In Vivo Drosophila RNAi Screen Identifies a Key Role of Ceramide Phosphoethanolamine for Glial Ensheathment of Axons.
PLoS Genet, 9(12) Art. No. e1003980 (2013)
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Ronny Herzog, Dominik Schwudke, Andrej Shevchenko
LipidXplorer: Software for Quantitative Shotgun Lipidomics Compatible with Multiple Mass Spectrometry Platforms
In: Current Protocols in Bioinformatics ; 43. (Eds.) Andreas D. Baxevanis,Hoboken, USA,Wiley (2013),141201-141230 Ch. 1412
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Virgínia Maria Ferreira Resende, Andrej Vasilj, Keity Souza Santos, Mario Sergio Palma, Andrej Shevchenko
Proteome and phosphoproteome of Africanized and European honeybee venoms.
Proteomics, 13(17) 2638-2648 (2013)
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Oksana Lavrynenko, Ruslan Nedielkov, Heiko M Möller, Andrej Shevchenko
Girard derivatization for LC-MS/MS profiling of endogenous ecdysteroids in Drosophila
J Lipid Res, 54(8) 2265-2272 (2013)
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Karl F Lechtreck, Jason M Brown, Julio Sampaio, Julie M Craft, Andrej Shevchenko, James E Evans, George B Witman
Cycling of the signaling protein phospholipase D through cilia requires the BBSome only for the export phase.
J Cell Biol, 201(2) 249-261 (2013)
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Zoltan Maliga, Magno Junqueira, Yusuke Toyoda, Andreas Ettinger, Felipe Mora-Bermúdez, Robin Klemm, Andrej Vasilj, E. Guhr, Itziar Ibarlucea-Benitez, Ina Poser, Enzio Bonifacio, Wieland B. Huttner, Andrej Shevchenko, Anthony Hyman
A genomic toolkit to investigate kinesin and myosin motor function in cells.
Nat Cell Biol, 15(3) 325-334 (2013)
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Céline Fernandez, Marianne Sandin, Julio Sampaio, Peter Almgren, Krzysztof Narkiewicz, Michaela Hoffmann, Thomas Hedner, Björn Wahlstrand, Kai Simons, Andrej Shevchenko, Peter James, Olle Melander
Plasma lipid composition and risk of developing cardiovascular disease.
PLoS ONE, 8(8) Art. No. e71846 (2013)
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J Gräßler, S Kopprasch, J Passauer, Steffi Fischer, Kai Schuhmann, S Bergmann, G Siegert, Andrej Shevchenko, Stefan R. Bornstein, U Julius
Differential effects of lipoprotein apheresis by lipidfiltration or dextran sulfate adsorption on lipidomic profile.
Atheroscler Suppl, 14(1) 151-155 (2013)

2012

Christoph Thiele, Cyrus Papan, Dominik Hoelper, Kalina Kusserow, Anne Gaebler, Mario Schoene, Kira Piotrowitz, Daniel Lohmann, Johanna Spandl, Ana Stevanovic, Andrej Shevchenko, Lars Kuerschner
Tracing fatty acid metabolism by click chemistry.
ACS Chem Biol, 7(12) 2004-2011 (2012)
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Michael Groessl, H Luksch, Angela Rösen-Wolff, Andrej Shevchenko, Marc Gentzel
Profiling of the human monocytic cell secretome by quantitative label-free mass spectrometry identifies stimulus-specific cytokines and proinflammatory proteins.
Proteomics, 12(18) 2833-2842 (2012)
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Andrej Vasilj, Marc Gentzel, Elke Ueberham, Rolf Gebhardt, Andrej Shevchenko
Tissue proteomics by one-dimensional gel electrophoresis combined with label-free protein quantification
J Proteome Res, 11(7) 3680-3689 (2012)
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Wilhelm Palm, Julio Sampaio, Marko Brankatschk, Maria Carvalho, Ali Mahmoud, Andrej Shevchenko, Suzanne Eaton
Lipoproteins in Drosophila melanogaster-Assembly, Function, and Influence on Tissue Lipid Composition
PLoS Genet, 8(7) Art. No. e1002828 (2012)
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Maria Carvalho, Julio Sampaio, Wilhelm Palm, Marko Brankatschk, Suzanne Eaton, Andrej Shevchenko
Effects of diet and development on the Drosophila lipidome
Mol Syst Biol, 8 Art. No. 600 (2012)
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Ronny Herzog
Novel concepts for lipid identification from shotgun mass spectra using a customized query language
Ph.D. Thesis,Technische Universität Dresden, Dresden, Germany (2012)
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Sanjay Kumar, Hae Yong Yoo, Akiko Kumagai, Anna Shevchenko, Andrej Shevchenko, William G Dunphy
Role for Rif1 in the checkpoint response to damaged DNA in Xenopus egg extracts
Cell Cycle, 11(6) 1183-1194 (2012)
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Andrea Knaust, Andrej Shevchenko, Anna Shevchenko
Horizontal carryover of proteins on one-dimensional polyacrylamide gels may jeopardize gel-enhanced liquid chromatography mass spectrometry proteomic interpretations.
Anal Biochem, 421(2) 779-781 (2012)
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Sophie Ayciriex, Marina Le Guédard, Nadine Camougrand, Gisèle Velours, Mario Schoene, Sebastien Leone, Valerie Wattelet-Boyer, Jean-William Dupuy, Andrej Shevchenko, Jean-Marie Schmitter, René Lessire, Jean-Jacques Bessoule, Eric Testet
YPR139c/LOA1 encodes a novel lysophosphatidic acid acyltransferase associated with lipid droplets and involved in TAG homeostasis.
Mol Biol Cell, 23(2) 233-246 (2012)
---
Kai Schuhmann, Reinaldo Almeida, Mark Baumert, Ronny Herzog, Stefan R. Bornstein, Andrej Shevchenko
Shotgun lipidomics on a LTQ Orbitrap mass spectrometer by successive switching between acquisition polarity modes.
J Mass Spectrom, 47(1) 96-104 (2012)
---
Mathias J. Gerl, Julio Sampaio, Lucie Kalvodova, Jean-Marc Verbavatz, Andrej Shevchenko, Cornelia Schroeder, Kai Simons
Quantitative analysis of the lipidomes of the influenza virus envelope and MDCK cell apical membrane
J Cell Biol, 196(2) 213-221 (2012)
---
Luis M B B Estronca, Jorge Santos Da Silva, Julio Sampaio, Andrej Shevchenko, Paul Verkade, Alfin D N Vaz, Winchil Vaz, Otilia V Vieira
Molecular etiology of atherogenesis--in vitro induction of lipidosis in macrophages with a new LDL model
PLoS ONE, 7(4) Art. No. e34822 (2012)
---
Ronny Herzog, Kai Schuhmann, Dominik Schwudke, Julio Sampaio, Stefan R. Bornstein, Michael Schroeder, Andrej Shevchenko
LipidXplorer: A Software for Consensual Cross-Platform Lipidomics.
PLoS ONE, 7(1) Art. No. e29851 (2012)
---
Christian Klose, Michal Surma, Mathias J. Gerl, Felix Meyenhofer, Andrej Shevchenko, Kai Simons
Flexibility of a Eukaryotic Lipidome – Insights from Yeast Lipidomics
PLoS ONE, 7(4) Art. No. e35063 (2012)
---
Lars Kuerschner, Doris Richter, Hans Kristian Hannibal-Bach, Anne Gaebler, Andrej Shevchenko, Christer S. Ejsing, Christoph Thiele
Exogenous ether lipids predominantly target mitochondria.
PLoS ONE, 7(2) Art. No. e31342 (2012)
---
Aurelie Tomczak, Jana Sontheimer, David N. Drechsel, Rainer Hausdorf, Marc Gentzel, Andrej Shevchenko, Stefanie Eichler, Karim Fahmy, Frank Buchholz, Maria Teresa Pisabarro
3D profile-based approach to proteome-wide discovery of novel human chemokines
PLoS ONE, 7(5) Art. No. e36151 (2012)

2011

Marina Edelson-Averbukh, Andrej Shevchenko, Rüdiger Pipkorn, Wolf D Lehmann
Discrimination between peptide O-sulfo- and O-phosphotyrosine residues by negative ion mode electrospray tandem mass spectrometry.
J Am Soc Mass Spectrom, 22(12) 2256-2268 (2011)
---
Dominik Schwudke, Kai Schuhmann, Ronny Herzog, Stefan R. Bornstein, Andrej Shevchenko
Shotgun lipidomics on high resolution mass spectrometers.
Cold Spring Harb Perspect Biol, 3(9) Art. No. a004614 (2011)
---
Kai Schuhmann, Ronny Herzog, Dominik Schwudke, Wolfgang Metelmann-Strupat, Stefan R. Bornstein, Andrej Shevchenko
Bottom-up shotgun lipidomics by higher energy collisional dissociation on LTQ Orbitrap mass spectrometers.
Anal Chem, 83(14) 5480-5487 (2011)
---
Dragomir Krastev, Mikolaj Slabicki, Maciej Paszkowski-Rogacz, Nina C Hubner, Magno Junqueira, Andrej Shevchenko, Matthias Mann, Karla M. Neugebauer, Frank Buchholz
A systematic RNAi synthetic interaction screen reveals a link between p53 and snoRNP assembly.
Nat Cell Biol, 13(7) 809-818 (2011)
---
Christine Moessinger, Lars Kuerschner, Johanna Spandl, Andrej Shevchenko, Christoph Thiele
Human lysophosphatidylcholine acyltransferases 1 and 2 are located in lipid droplets where they catalyze the formation of phosphatidylcholine.
J Biol Chem, 286(24) 21330-21339 (2011)
---
Akiko Kumagai, Anna Shevchenko, Andrej Shevchenko, William G Dunphy
Direct regulation of Treslin by cyclin-dependent kinase is essential for the onset of DNA replication.
J Cell Biol, 193(6) 995-1007 (2011)
---
Tiago S. Balbuena, Leonardo Jo, Fernanda P Pieruzzi, Leonardo L C Dias, Vanildo Silveira, Claudete Santa-Catarina, Magno Junqueira, Jay J Thelen, Andrej Shevchenko, Eny I S Floh
Differential proteome analysis of mature and germinated embryos of Araucaria angustifolia.
Phytochemistry, 72(4-5) 302-311 (2011)
---
Victor Spirin, Alexander Shpunt, Jan Seebacher, Marc Gentzel, Andrej Shevchenko, Steven Gygi, Shamil Sunyaev
Assigning spectrum-specific P-values to protein identifications by mass spectrometry.
Bioinformatics, 27(8) 1128-1134 (2011)
---
Sven Danckwardt, Anne-Susan Gantzert, Stephan Macher-Goeppinger, Hans Christian Probst, Marc Gentzel, Matthias Wilm, Hermann-Josef Gröne, Peter Schirmacher, Matthias W. Hentze, Andreas E Kulozik
p38 MAPK controls prothrombin expression by regulated RNA 3' end processing.
Mol Cell, 41(3) 298-310 (2011)
---
Julio Sampaio, Christian Klose, Kai Simons, Mathias J. Gerl, Christer S. Ejsing, Andrej Shevchenko
Membrane lipidome of an epithelial cell line
Proc Natl Acad Sci U.S.A., 108(5) 1903-1907 (2011)
---
Ronny Herzog, Dominik Schwudke, Kai Schuhmann, Julio Sampaio, Stefan R. Bornstein, Michael Schroeder, Andrej Shevchenko
A novel informatics concept for high-throughput shotgun lipidomics based on the molecular fragmentation query language.
Genome Biol, 12(1) Art. No. R8 (2011)
---
Céline Fernandez, Kai Schuhmann, Ronny Herzog, Barbara Fielding, Keith Frayn, Andrej Shevchenko, Peter James, Cecilia Holm, Kristoffer Ström
Altered desaturation and elongation of fatty acids in hormone-sensitive lipase null mice.
PLoS ONE, 6(6) Art. No. e21603 (2011)

2010

Sider Penkov, Fanny Mende, Vyacheslav Zagoriy, Cihan Erkut, René Martin, Ulrike Pässler, Kai Schuhmann, Dominik Schwudke, Margit Gruner, Jana Mäntler, Thomas Müller-Reichert, Andrej Shevchenko, Hans-Joachim Knölker, Teymuras V. Kurzchalia
Maradolipids: Diacyltrehalose Glycolipids Specific to Dauer Larva in Caenorhabditis elegans.
Angew Chem Int Ed Engl, 49(49) 9430-9435 (2010)
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Maria Carvalho, Dominik Schwudke, Julio Sampaio, Wilhelm Palm, Isabelle Riezman, Gautam Dey, Gagan D Gupta, Satyajit Mayor, Howard Riezman, Andrej Shevchenko, Teymuras V. Kurzchalia, Suzanne Eaton
Survival strategies of a sterol auxotroph.
Development, 137(21) 3675-3685 (2010)
---
Ann Caroline Feike, Klara Rachor, Marc Gentzel, Alexandra Schambony
Wnt5a/Ror2-induced upregulation of xPAPC requires xShcA.
Biochem Biophys Res Commun, 400(4) 500-506 (2010)
---
Christian Klose, Christer S. Ejsing, Anna J. Garcia-Sáez, Hermann-Josef Kaiser, Julio Sampaio, Michal Surma, Andrej Shevchenko, Petra Schwille, Kai Simons
Yeast lipids can phase-separate into micrometer-scale membrane domains
J Biol Chem, 285(39) 30224-30232 (2010)
---
Andrej Shevchenko, Kai Simons
Lipidomics: coming to grips with lipid diversity.
Nat Rev Mol Cell Biol, 11(8) 593-598 (2010)
---
Adam Reich, Dominik Schwudke, Michael Meurer, Bodo Lehmann, Andrej Shevchenko
Lipidome of narrow-band ultraviolet B irradiated keratinocytes shows apoptotic hallmarks.
Exp Dermatol, 19(8) 103-110 (2010)
---
Iris Eke, Ulrike Koch, Stephanie Hehlgans, Veit Sandfort, Fabio Stanchi, Daniel Zips, Michael Baumann, Anna Shevchenko, Christian Pilarsky, Michael Haase, Gustavo Baretton, Véronique Calleja, Banafshé Larijani, Reinhard Fässler, Nils Cordes
PINCH1 regulates Akt1 activation and enhances radioresistance by inhibiting PP1alpha.
J Clin Invest, 120(7) 2516-2527 (2010)
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Mikolaj Slabicki, Mirko Theis, Dragomir Krastev, Sergey Samsonov, Emeline Mundwiller, Magno Junqueira, Maciej Paszkowski-Rogacz, Joan Teyra, Anne-Kristin Heninger, Ina Poser, Fabienne Prieur, Jérémy Truchetto, Christian Confavreux, Cécilia Marelli, Alexandra Durr, Jean Philippe Camdessanche, Alexis Brice, Andrej Shevchenko, Maria Teresa Pisabarro, Giovanni Stevanin, Frank Buchholz
A genome-scale DNA repair RNAi screen identifies SPG48 as a novel gene associated with hereditary spastic paraplegia.
PLoS Biol, 8(6) Art. No. e1000408 (2010)
---
Indranil Sinha, Luke Buchanan, Michelle Rönnerblad, Carolina Bonilla, Mickaël Durand-Dubief, Andrej Shevchenko, Michael Grunstein, A. Francis Stewart, Karl Ekwall
Genome-wide mapping of histone modifications and mass spectrometry reveal H4 acetylation bias and H3K36 methylation at gene promoters in fission yeast
Epigenomics, 2(3) 377-393 (2010)
---
David K. Breslow, Sean R. Collins, Bernd Bodenmiller, Ruedi Aebersold, Kai Simons, Andrej Shevchenko, Christer S. Ejsing, Jonathan S. Weissman
Orm family proteins mediate sphingolipid homeostasis
Nature, 463(7284) 1048-1053 (2010)
---
Vincent Gache, Patrice Waridel, Christof Winter, Aurelie Juhem, Michael Schroeder, Andrej Shevchenko, Andrei V. Popov
Xenopus meiotic microtubule-associated interactome.
PLoS ONE, 5(2) Art. No. e9248 (2010)
---
Akiko Kumagai, Anna Shevchenko, Andrej Shevchenko, William G Dunphy
Treslin collaborates with TopBP1 in triggering the initiation of DNA replication.
Cell, 140(3) 349-359 (2010)

2009

Magno Junqueira
Systematic characterization of mammalian protein complexes by shotgun liquid chromatography tandem mass spectrometry
Ph.D. Thesis,Technische Universität Dresden, Dresden, Germany (2009)
---
Luke Buchanan, Mickaël Durand-Dubief, Assen Roguev, Cagri Sakalar, Brian Wilhelm, Annelie Strålfors, Anna Shevchenko, Rein Aasland, Andrej Shevchenko, Karl Ekwall, A. Francis Stewart
The Schizosaccharomyces pombe JmjC-protein, Msc1, prevents H2A.Z localization in centromeric and subtelomeric chromatin domains.
PLoS Genet, 5(11) Art. No. e1000726 (2009)
---
Marina Le Guédard, Jean-Jacques Bessoule, Valérie Boyer, Sophie Ayciriex, Gisèle Velours, Willem Kulik, Christer S. Ejsing, Andrej Shevchenko, Denis Coulon, René Lessire, Eric Testet
PSI1 is responsible for the stearic acid enrichment that is characteristic of phosphatidylinositol in yeast.
FEBS J, 276(21) 6412-6424 (2009)
---
Dirk Benndorf, Carsten Vogt, Nico Jehmlich, Yvonne Schmidt, Henrik Thomas, Gary Woffendin, Andrej Shevchenko, Hans-Hermann Richnow, Martin von Bergen
Improving protein extraction and separation methods for investigating the metaproteome of anaerobic benzene communities within sediments.
Biodegradation, 20(6) 737-750 (2009)
---
Stefano Maffini, Ana R R Maia, Amity L Manning, Zoltan Maliga, Ana L Pereira, Magno Junqueira, Andrej Shevchenko, Anthony A. Hyman, John R. Yates, Niels Galjart, Duane A Compton, Helder Maiato
Motor-independent targeting of CLASPs to kinetochores by CENP-E promotes microtubule turnover and poleward flux.
Curr Biol, 19(18) 1566-1572 (2009)
---
Marcus Ståhlman, Christer S. Ejsing, Kirill V Tarasov, Jeanna Perman, Jan Borén, Kim Ekroos
High-throughput shotgun lipidomics by quadrupole time-of-flight mass spectrometry.
J Chromatogr B Analyt Technol Biomed Life Sci, 877(26) 2664-2672 (2009)
---
Lucie Kalvodova, Julio Sampaio, Sandra Cordo, Christer S. Ejsing, Andrej Shevchenko, Kai Simons
The lipidomes of vesicular stomatitis virus, semliki forest virus, and the host plasma membrane analyzed by quantitative shotgun mass spectrometry.
J Virol, 83(16) 7996-8003 (2009)
---
Christina Valcu, Magno Junqueira, Andrej Shevchenko, Katja Schlink
Comparative proteomic analysis of responses to pathogen infection and wounding in Fagus sylvatica.
J Proteome Res, 8(8) 4077-4091 (2009)
---
Hilde Raa, Stine Grimmer, Dominik Schwudke, Jonas Bergan, Sébastien Wälchli, Tore Skotland, Andrej Shevchenko, Kirsten Sandvig
Glycosphingolipid requirements for endosome-to-golgi transport of shiga toxin.
Traffic, 10(7) 868-882 (2009)
---
Marina Edelson-Averbukh, Andrej Shevchenko, Rüdiger Pipkorn, Wolf D Lehmann
Gas-phase intramolecular phosphate shift in phosphotyrosine-containing peptide monoanions.
Anal Chem, 81(11) 4369-4381 (2009)
---
Hae Yong Yoo, Akiko Kumagai, Anna Shevchenko, Andrej Shevchenko, William G Dunphy
The Mre11-Rad50-Nbs1 complex mediates activation of TopBP1 by ATM.
Mol Biol Cell, 20(9) 2351-2360 (2009)
---
Robin W. Klemm, Christer S. Ejsing, Michal Surma, Hermann-Josef Kaiser, Mathias J. Gerl, Julio Sampaio, Quentin de Robillard, Charles Ferguson, Tomasz J. Proszynski, Andrej Shevchenko, Kai Simons
Segregation of sphingolipids and sterols during formation of secretory vesicles at the trans-Golgi network.
J Cell Biol, 185(4) 601-612 (2009)
---
Mirko Theis, Mikolaj Slabicki, Magno Junqueira, Maciej Paszkowski-Rogacz, Jana Sontheimer, Ralf Kittler, Anne-Kristin Heninger, Timo Glatter, Kristi Kruusmaa, Ina Poser, Anthony A. Hyman, Maria Teresa Pisabarro, Matthias Gstaiger, Rudolf Aebersold, Andrej Shevchenko, Frank Buchholz
Comparative profiling identifies C13orf3 as a component of the Ska complex required for mammalian cell division.
EMBO J, 28(10) 1453-1465 (2009)
---
Li Ding, Maciej Paszkowski-Rogacz, Anja Nitzsche, Mikolaj Slabicki, Anne-Kristin Heninger, Ingrid de Vries, Ralf Kittler, Magno Junqueira, Andrej Shevchenko, Herbert Schulz, Norbert Hubner, Michael Xavier Doss, Agapios Sachinidis, Juergen Hescheler, Roberto Iacone, Konstantinos Anastassiadis, A. Francis Stewart, Maria Teresa Pisabarro, Antonio Caldarelli, Ina Poser, Mirko Theis, Frank Buchholz
A genome-scale RNAi screen for Oct4 modulators defines a role of the Paf1 complex for embryonic stem cell identity.
Cell Stem Cell, 4(5) 403-415 (2009)
---
Kanako Saito, Veronique Dubreuil, Yoko Arai, Michaela Wilsch-Bräuninger, Dominik Schwudke, Gesine Saher, Takaki Miyata, Georg Breier, Christoph Thiele, Andrej Shevchenko, Klaus-Armin Nave, Wieland B. Huttner
Ablation of cholesterol biosynthesis in neural stem cells increases their VEGF expression and angiogenesis but causes neuron apoptosis.
Proc Natl Acad Sci U.S.A., 106(20) 8350-8355 (2009)
---
Tiago S. Balbuena, Vanildo Silveira, Magno Junqueira, Leonardo L C Dias, Claudete Santa-Catarina, Andrej Shevchenko, Eny I S Floh
Changes in the 2-DE protein profile during zygotic embryogenesis in the Brazilian Pine (Araucaria angustifolia).
J Proteomics, 72(3) 337-352 (2009)
---
Andrej Shevchenko, Christina Valcu, Magno Junqueira
Tools for exploring the proteomosphere.
J Proteomics, 72(2) 137-144 (2009)
---
Tobias Zech, Christer S. Ejsing, Katharina Gaus, Ben de Wet, Andrej Shevchenko, Kai Simons, Thomas Harder
Accumulation of raft lipids in T-cell plasma membrane domains engaged in TCR signalling.
EMBO J, 28(5) 466-476 (2009)
---
Juergen Graessler, Dominik Schwudke, Peter E Schwarz, Ronny Herzog, Andrej Shevchenko, Stefan R. Bornstein
Top-down lipidomics reveals ether lipid deficiency in blood plasma of hypertensive patients.
PLoS ONE, 4(7) Art. No. e6261 (2009)
---
Natalie Wielsch
Optimized GeLC-MS/MS for bottom-up proteomics
Ph.D. Thesis,Technische Universität Dresden, Dresden, Germany (2009)
---
Christer S. Ejsing, Julio Sampaio, Vineeth Surendranath, Eva Duchoslav, Kim Ekroos, Robin W. Klemm, Kai Simons, Andrej Shevchenko
Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry.
Proc Natl Acad Sci U.S.A., 106(7) 2136-2141 (2009)
---
Elena Bonzón-Kulichenko, Dominik Schwudke, Nilda Gallardo, Eduardo Moltó, Teresa Fernández-Agulló, Andrej Shevchenko, Antonio Andrés
Central leptin regulates total ceramide content and sterol regulatory element binding protein-1C proteolytic maturation in rat white adipose tissue.
Endocrinology, 150(1) 169-178 (2009)

2008

Henrik Thomas, Andrej Shevchenko
Simplified validation of borderline hits of database searches.
Proteomics, 8(20) 4173-4177 (2008)
---
Paulo C. Carvalho, Magno Junqueira, Richard H Valente, Gilberto B Domont
Caititu: a tool to graphically represent peptide sequence coverage and domain distribution.
J Proteomics, 71(4) 486-489 (2008)
---
Magno Junqueira, Victor Spirin, Tiago S. Balbuena, Patrice Waridel, Vineeth Surendranath, Grigoriy Kryukov, Ivan Adzhubei, Henrik Thomas, Shamil Sunyaev, Andrej Shevchenko
Separating the wheat from the chaff: unbiased filtering of background tandem mass spectra improves protein identification.
J Proteome Res, 7(8) 3382-3395 (2008)
---
Magno Junqueira, Victor Spirin, Tiago S. Balbuena, Henrik Thomas, Ivan Adzhubei, Shamil Sunyaev, Andrej Shevchenko
Protein identification pipeline for the homology-driven proteomics.
J Proteomics, 71(3) 346-356 (2008)
---
Eugeni V. Entchev, Dominik Schwudke, Vyacheslav Zagoriy, Vitali Matyash, Aliona Bogdanova, Bianca Habermann, Lin Zhu, Andrej Shevchenko, Teymuras V. Kurzchalia
LET-767 is required for the production of branched chain and long chain fatty acids in Caenorhabditis elegans.
J Biol Chem, 283(25) 17550-17560 (2008)
---
Vitali Matyash, Gerhard Liebisch, Teymuras V. Kurzchalia, Andrej Shevchenko, Dominik Schwudke
Lipid extraction by methyl-tert-butyl ether for high-throughput lipidomics.
J Lipid Res, 49(5) 1137-1146 (2008)
---
Lars Demmel, Mike Beck, Christian Klose, Anne-Lore Schlaitz, Yvonne Gloor, Peggy P. Hsu, Jan Havlis, Andrej Shevchenko, Eberhard Krause, Yannis Kalaidzidis, Christiane Walch-Solimena
Nucleocytoplasmic shuttling of the Golgi phosphatidylinositol 4-kinase Pik1 is regulated by 14-3-3 proteins and coordinates Golgi function with cell growth.
Mol Biol Cell, 19(3) 1046-1061 (2008)
---
Anna Shevchenko, Assen Roguev, Daniel Schaft, Luke Buchanan, Bianca Habermann, Cagri Sakalar, Henrik Thomas, Nevan J Krogan, Andrej Shevchenko, A. Francis Stewart
Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment.
Genome Biol, 9(11) 167-167 (2008)
---
Dominik Schwudke, Asgar Ergin, Kathrin Michael, Sven Volkmar, Bernd Appel, Dorothea Knabner, Antje Konietzny, Eckhard Strauch
Broad-host-range Yersinia phage PY100: genome sequence, proteome analysis of virions, and DNA packaging strategy.
J Bacteriol, 190(1) 332-342 (2008)

2007

Ching-Ju Tsai, Christer S. Ejsing, Andrej Shevchenko, Christine Ziegler
The role of lipids and salts in two-dimensional crystallization of the glycine-betaine transporter BetP from Corynebacterium glutamicum.
J Struct Biol, 160(3) 275-286 (2007)
---
Nuran Ozcan, Christer S. Ejsing, Andrej Shevchenko, Andrej Lipski, Susanne Morbach, Reinhard Krämer
Osmolality, temperature, and membrane lipid composition modulate the activity of betaine transporter BetP in Corynebacterium glutamicum.
J Bacteriol, 189(20) 7485-7496 (2007)
---
Adriana Katz, Patrice Waridel, Andrej Shevchenko, Uri Pick
Salt-induced changes in the plasma membrane proteome of the halotolerant alga Dunaliella salina as revealed by blue native gel electrophoresis and nano-LC-MS/MS analysis.
Mol Cell Proteomics, 6(9) 1459-1472 (2007)
---
Patrice Waridel, Ari Frank, Henrik Thomas, Vineeth Surendranath, Shamil Sunyaev, Pavel Pevzner, Andrej Shevchenko
Sequence similarity-driven proteomics in organisms with unknown genomes by LC-MS/MS and automated de novo sequencing.
Proteomics, 7(14) 2318-2329 (2007)
---
Dominik Schwudke, J Thomas Hannich, Vineeth Surendranath, Vinciane Grimard, Thomas Moehring, Lyle Burton, Teymuras V. Kurzchalia, Andrej Shevchenko
Top-down lipidomic screens by multivariate analysis of high-resolution survey mass spectra.
Anal Chem, 79(11) 4083-4093 (2007)
---
Hae Yong Yoo, Akiko Kumagai, Anna Shevchenko, Andrej Shevchenko, William G Dunphy
Ataxia-telangiectasia mutated (ATM)-dependent activation of ATR occurs through phosphorylation of TopBP1 by ATM.
J Biol Chem, 282(24) 17501-17506 (2007)
---
Eckhard Strauch, Dominik Schwudke, Michael Linscheid
Predatory mechanisms of Bdellovibrio and like organisms.
Future Microbiol, 2 63-73 (2007)
---
Sebastien Charneau, Magno Junqueira, Camila M. Costa, Daniele L. Pires, Ellen S. Fernandes, Ana C. Bussacos, Marcelo V. de Sousa, Carlos A. O. Ricart, Andrej Shevchenko, Antonio R. L. Teixeira
The saliva proteome of the blood-feeding insect Triatoma infestans is rich in platelet-aggregation inhibitors
Int J Mass Spectrom, 268(2 - 3 ) 265-276 (2007)
---
Anne-Lore Schlaitz, Martin Srayko, Alexander Dammermann, Sophie Quintin, Natalie Wielsch, Ian MacLeod, Quentin de Robillard, Andrea Zinke, John R. Yates, Thomas Müller-Reichert, Andrej Shevchenko, Karen Oegema, Anthony A. Hyman
The C. elegans RSA complex localizes protein phosphatase 2A to centrosomes and regulates mitotic spindle assembly.
Cell, 128(1) 115-127 (2007)
---
Dominik Schwudke, Gerhard Liebisch, Ronny Herzog, Gerd Schmitz, Andrej Shevchenko
Shotgun lipidomics by tandem mass spectrometry under data-dependent acquisition control
In: Spezialized analytical methods and lipids in disease. (Eds.) H. Alex Brown Methods in enzymology ; 433.,Amsterdam, Netherlands,Elsevier (2007),175-191 Ch. 10
---
Vincent Gache, Patrice Waridel, Sylvie Luche, Andrej Shevchenko, Andrei V. Popov
Purification and mass spectrometry identification of microtubule-binding proteins from Xenopus egg extracts
In: Microtubule Protocols. (Eds.) Jun Zhou Methods in molecular medicine.,Totowa, USA,Humana Press (2007),29-43 Ch. 3

2006

Pierre-Marie Dehé, Bernhard Dichtl, Daniel Schaft, Assen Roguev, Mercè Pamblanco, Régine Lebrun, Alfonso Rodríguez-Gil, Msau Mkandawire, Katharina Landsberg, Anna Shevchenko, Andrej Shevchenko, Lorena E Rosaleny, Vicente Tordera, Sebastián Chávez, A. Francis Stewart, Vincent Géli
Protein interactions within the Set1 complex and their roles in the regulation of histone 3 lysine 4 methylation.
J Biol Chem, 281(46) 35404-35412 (2006)
---
Natalie Wielsch, Henrik Thomas, Vineeth Surendranath, Patrice Waridel, Ari Frank, Pavel Pevzner, Andrej Shevchenko
Rapid validation of protein identifications with the borderline statistical confidence via de novo sequencing and MS BLAST searches.
J Proteome Res, 5(9) 2448-2456 (2006)
---
Christer S. Ejsing, Eva Duchoslav, Julio Sampaio, Kai Simons, Ron Bonner, Christoph Thiele, Kim Ekroos, Andrej Shevchenko
Automated identification and quantification of glycerophospholipid molecular species by multiple precursor ion scanning.
Anal Chem, 78(17) 6202-6214 (2006)
---
Marek Sebela, Tat'ána Stosová, Jan Havlis, Natalie Wielsch, Henrik Thomas, Zbynek Zdráhal, Andrej Shevchenko
Thermostable trypsin conjugates for high-throughput proteomics: synthesis and performance evaluation.
Proteomics, 6(10) 2959-2963 (2006)
---
Vinzenz Link, Lara Carvalho, Irinka Castanon, Petra Stockinger, Andrej Shevchenko, Carl-Philipp Heisenberg
Identification of regulators of germ layer morphogenesis using proteomics in zebrafish.
J Cell Sci, 119(Pt 10) 2073-2083 (2006)
---
Christer S. Ejsing, Thomas Moehring, Ute Bahr, Eva Duchoslav, Michael Karas, Kai Simons, Andrej Shevchenko
Collision-induced dissociation pathways of yeast sphingolipids and their molecular profiling in total lipid extracts: a study by quadrupole TOF and linear ion trap-orbitrap mass spectrometry.
J Mass Spectrom, 41(3) 372-389 (2006)
---
Vinzenz Link, Andrej Shevchenko, Carl-Philipp Heisenberg
Proteomics of early zebrafish embryos.
BMC Dev Biol, 6 1-1 (2006)
---
Rafael A P Guércio, Anna Shevchenko, Andrej Shevchenko, Jorge L López-Lozano, Jaime Paba, Marcelo V. de Sousa, Carlos A. O. Ricart
Ontogenetic variations in the venom proteome of the Amazonian snake Bothrops atrox.
Proteome Sci, 4 11-11 (2006)
---
Dominik Schwudke, Jeffrey Oegema, Lyle Burton, Eugeni V. Entchev, J Thomas Hannich, Christer S. Ejsing, Teymuras V. Kurzchalia, Andrej Shevchenko
Lipid profiling by multiple precursor and neutral loss scanning driven by the data-dependent acquisition.
Anal Chem, 78(2) 585-595 (2006)
---
Andrej Shevchenko, Henrik Tomas, Jan Havlis, Jesper V Olsen, Matthias Mann
In-gel digestion for mass spectrometric characterization of proteins and proteomes.
Nat Protoc, 1(6) 2856-2860 (2006)
---
Adam J. Liska, Andrej Shevchenko
Identification of proteins from organisms with unsequenced genomes by tandem mass spectrometry and sequence-similarity database searching tools
In: Cell biology : a laboratory handbook. (Eds.) Julio E. Celis Part 4.,Amsterdam, Netherlands,Elsevier (2006),399-407 Ch. 51
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Joachim Füllekrug, Anna Shevchenko, Andrej Shevchenko, Kai Simons
Identification of glycosylated marker proteins of epithelial polarity in MDCK cells by homology driven proteomics.
BMC Biochem, 7 8-8 (2006)

2005

Joon Lee, Daniel A Gold, Anna Shevchenko, Andrej Shevchenko, William G Dunphy
Roles of replication fork-interacting and Chk1-activating domains from Claspin in a DNA replication checkpoint response.
Mol Biol Cell, 16(11) 5269-5282 (2005)
---
Adam J. Liska, Shamil Sunyaev, Ignat N Shilov, Dan A Schaeffer, Andrej Shevchenko
Error-tolerant EST database searches by tandem mass spectrometry and multiTag software.
Proteomics, 5(16) 4118-4122 (2005)
---
Yanmei Liu, Anna Shevchenko, Andrej Shevchenko, Arnold J Berk
Adenovirus exploits the cellular aggresome response to accelerate inactivation of the MRN complex.
J Virol, 79(22) 14004-14016 (2005)
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Marina N Nedelcheva, Assen Roguev, Luben B Dolapchiev, Andrej Shevchenko, Hristo B Taskov, Anna Shevchenko, A. Francis Stewart, Stoyno Stoynov
Uncoupling of unwinding from DNA synthesis implies regulation of MCM helicase by Tof1/Mrc1/Csm3 checkpoint complex.
J Mol Biol, 347(3) 509-521 (2005)
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Tobias Oelschlaegel, Martin Schwickart, Joao Matos, Aliona Bogdanova, Alain Camasses, Jan Havlis, Andrej Shevchenko, Wolfgang Zachariae
The yeast APC/C subunit Mnd2 prevents premature sister chromatid separation triggered by the meiosis-specific APC/C-Ama1.
Cell, 120(6) 773-788 (2005)
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Marek Sebela, David Kopecný, Zbynek Lamplot, Jan Havlis, Henrik Thomas, Andrej Shevchenko
Thermostable beta-cyclodextrin conjugates of two similar plant amine oxidases and their properties.
Biotechnol Appl Biochem, 41(Pt 1) 77-84 (2005)
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Anna Shevchenko, Mirta M. L. de Sousa, Patrice Waridel, Silvia Tolfo Bittencourt, Marcelo V. de Sousa, Andrej Shevchenko
Sequence similarity-based proteomics in insects: characterization of the larvae venom of the Brazilian moth Cerodirphia speciosa.
J Proteome Res, 4(3) 862-869 (2005)
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Lars Kuerschner, Christer S. Ejsing, Kim Ekroos, Andrej Shevchenko, Kurt I. Anderson, Christoph Thiele
Polyene-lipids: a new tool to image lipids.
Nat Methods, 2(1) 39-45 (2005)

2004

Hae Yong Yoo, Anna Shevchenko, Andrej Shevchenko, William G Dunphy
Mcm2 is a direct substrate of ATM and ATR during DNA damage and DNA replication checkpoint responses.
J Biol Chem, 279(51) 53353-53364 (2004)
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Adam J. Liska, Andrei V. Popov, Shamil Sunyaev, Peg Coughlin, Bianca Habermann, Anna Shevchenko, Peer Bork, Eric Karsenti, Andrej Shevchenko
Homology-based functional proteomics by mass spectrometry: application to the Xenopus microtubule-associated proteome.
Proteomics, 4(9) 2707-2721 (2004)
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Adam J. Liska, Andrej Shevchenko, Uri Pick, Adriana Katz
Enhanced photosynthesis and redox energy production contribute to salinity tolerance in Dunaliella as revealed by homology-based proteomics.
Plant Physiol, 136(1) 2806-2817 (2004)
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Adam J. Liska
The morality of problem selection in proteomics.
Proteomics, 4(7) 1929-1931 (2004)
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Jeanette L Ducut Sigala, Virginie Bottero, David B Young, Andrej Shevchenko, Frank Mercurio, Inder M Verma
Activation of transcription factor NF-kappaB requires ELKS, an IkappaB kinase regulatory subunit.
Science, 304(5679) 1963-1967 (2004)
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Jan Havlis, Andrej Shevchenko
Absolute quantification of proteins in solutions and in polyacrylamide gels by mass spectrometry.
Anal Chem, 76(11) 3029-3036 (2004)
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Tamaki Yano, Sonia López de Quinto, Yasuhisa Matsui, Anna Shevchenko, Andrej Shevchenko, Anne Ephrussi
Hrp48, a Drosophila hnRNPA/B homolog, binds and regulates translation of oskar mRNA.
Dev Cell, 6(5) 637-648 (2004)
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Hae Yong Yoo, Akiko Kumagai, Anna Shevchenko, Andrej Shevchenko, William G Dunphy
Adaptation of a DNA replication checkpoint response depends upon inactivation of Claspin by the Polo-like kinase.
Cell, 117(5) 575-588 (2004)
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Martin Schwickart, Jan Havlis, Bianca Habermann, Aliona Bogdanova, Alain Camasses, Tobias Oelschlaegel, Andrej Shevchenko, Wolfgang Zachariae
Swm1/Apc13 is an evolutionarily conserved subunit of the anaphase-promoting complex stabilizing the association of Cdc16 and Cdc27.
Mol Cell Biol, 24(8) 3562-3576 (2004)
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Bianca Habermann, Jeffrey Oegema, Shamil Sunyaev, Andrej Shevchenko
The power and the limitations of cross-species protein identification by mass spectrometry-driven sequence similarity searches.
Mol Cell Proteomics, 3(3) 238-249 (2004)
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Assen Roguev, Anna Shevchenko, Daniel Schaft, Henrik Thomas, A. Francis Stewart, Andrej Shevchenko
A comparative analysis of an orthologous proteomic environment in the yeasts Saccharomyces cerevisiae and Schizosaccharomyces pombe.
Mol Cell Proteomics, 3(2) 125-132 (2004)
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Henrik Thomas, Jan Havlis, Jan Peychl, Andrej Shevchenko
Dried-droplet probe preparation on AnchorChip targets for navigating the acquisition of matrix-assisted laser desorption/ionization time-of-flight spectra by fluorescence of matrix/analyte crystals.
Rapid Commun Mass Spectrom, 18(9) 923-930 (2004)

2003

Kim Ekroos, Christer S. Ejsing, Ute Bahr, Michael Karas, Kai Simons, Andrej Shevchenko
Charting molecular composition of phosphatidylcholines by fatty acid scanning and ion trap MS3 fragmentation.
J Lipid Res, 44(11) 2181-2192 (2003)
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Maria Dolores Ledesma, Jorge Santos Da Silva, Anna Schevchenko, Matthias Wilm, Carlos G Dotti
Proteomic characterisation of neuronal sphingolipid-cholesterol microdomains: role in plasminogen activation.
Brain Res, 987(1) 107-116 (2003)
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Arshad Desai, Sonja Rybina, Thomas Müller-Reichert, Andrej Shevchenko, Anna Shevchenko, Anthony A. Hyman, Karen Oegema
KNL-1 directs assembly of the microtubule-binding interface of the kinetochore in C. elegans.
Genes Dev, 17(19) 2421-2435 (2003)
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Alain Camasses, Aliona Bogdanova, Andrej Shevchenko, Wolfgang Zachariae
The CCT chaperonin promotes activation of the anaphase-promoting complex through the generation of functional Cdc20.
Mol Cell, 12(1) 87-100 (2003)
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Daniel Schaft, Assen Roguev, Kimberly M. Kotovic, Anna Shevchenko, Mihail Sarov, Andrej Shevchenko, Karla M. Neugebauer, A. Francis Stewart
The histone 3 lysine 36 methyltransferase, SET2, is involved in transcriptional elongation.
Nucleic Acids Res, 31(10) 2475-2482 (2003)
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Sebastian Schuck, Masanori Honsho, Kim Ekroos, Andrej Shevchenko, Kai Simons
Resistance of cell membranes to different detergents.
Proc Natl Acad Sci U.S.A., 100(10) 5795-5800 (2003)
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Shamil Sunyaev, Adam J. Liska, Alexander Golod, Anna Shevchenko, Andrej Shevchenko
MultiTag: multiple error-tolerant sequence tag search for the sequence-similarity identification of proteins by mass spectrometry.
Anal Chem, 75(6) 1307-1315 (2003)
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Assen Roguev, Daniel Schaft, Anna Shevchenko, Rein Aasland, Andrej Shevchenko, A. Francis Stewart
High conservation of the Set1/Rad6 axis of histone 3 lysine 4 methylation in budding and fission yeasts.
J Biol Chem, 278(10) 8487-8493 (2003)
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Jan Havlis, Henrik Thomas, Marek Sebela, Andrej Shevchenko
Fast-response proteomics by accelerated in-gel digestion of proteins.
Anal Chem, 75(6) 1300-1306 (2003)
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Anna Shevchenko, Shamil Sunyaev, Adam J. Liska, Peer Bork, Andrej Shevchenko
Nanoelectrospray tandem mass spectrometry and sequence similarity searching for identification of proteins from organisms with unknown genomes.
Methods Mol Biol, 211 221-234 (2003)
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Adam J. Liska, Andrej Shevchenko
Expanding the organismal scope of proteomics: cross-species protein identification by mass spectrometry and its implications.
Proteomics, 3(1) 19-28 (2003)
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Adam J. Liska, Andrej Shevchenko
Combining mass spectrometry with database interrogation strategies in proteomics
Trends Analyt Chem, 22(5) 291-298 (2003)

2002

Alexandre Soulard, Terry Lechler, Vladislav Spiridonov, Andrej Shevchenko, Anna Shevchenko, Rong Li, Barbara Winsor
Saccharomyces cerevisiae Bzz1p is implicated with type I myosins in actin patch polarization and is able to recruit actin-polymerizing machinery in vitro.
Mol Cell Biol, 22(22) 7889-7906 (2002)
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Josephine N Harada, Anna Shevchenko, Andrej Shevchenko, David C. Pallas, Arnold J Berk
Analysis of the adenovirus E1B-55K-anchored proteome reveals its link to ubiquitination machinery.
J Virol, 76(18) 9194-9206 (2002)
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Jennitte L Stevens, Greg T Cantin, Gang Wang, Andrej Shevchenko, Anna Shevchenko, Arnold J Berk
Transcription control by E1A and MAP kinase pathway via Sur2 mediator subunit.
Science, 296(5568) 755-758 (2002)
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Kim Ekroos, Igor V. Chernushevich, Kai Simons, Andrej Shevchenko
Quantitative profiling of phospholipids by multiple precursor ion scanning on a hybrid quadrupole time-of-flight mass spectrometer.
Anal Chem, 74(5) 941-949 (2002)
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Anna Shevchenko, Daniel Schaft, Assen Roguev, W W M Pim Pijnappel, A. Francis Stewart, Andrej Shevchenko
Deciphering protein complexes and protein interaction networks by tandem affinity purification and mass spectrometry: analytical perspective.
Mol Cell Proteomics, 1(3) 204-212 (2002)
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Kim Ekroos, Andrej Shevchenko
Simple two-point calibration of hybrid quadrupole time-of-flight instruments using a synthetic lipid standard.
Rapid Commun Mass Spectrom, 16(12) 1254-1255 (2002)
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Andrej Shevchenko, Igor V. Chernushevich, Anna Shevchenko, Matthias Wilm, Matthias Mann
"De novo" sequencing of peptides recovered from in-gel digested proteins by nanoelectrospray tandem mass spectrometry.
Mol Biotechnol, 20(1) 107-118 (2002)
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Raymond J. Deshaies, Jae Hong Seol, W Hayes McDonald, Gregory Cope, Svetlana Lyapina, Andrej Shevchenko, Anna Shevchenko, Rati Verma, John R. Yates
Charting the protein complexome in yeast by mass spectrometry.
Mol Cell Proteomics, 1(1) 3-10 (2002)

2001

Alexandra C. Moreno-Borchart, Katrin Strasser, Martin G. Finkbeiner, Anna Shevchenko, Andrej Shevchenko, Michael Knop
Prospore membrane formation linked to the leading edge protein (LEP) coat assembly.
EMBO J, 20(24) 6946-6957 (2001)
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Anna Shevchenko, Andrej Shevchenko
Evaluation of the efficiency of in-gel digestion of proteins by peptide isotopic labeling and MALDI mass spectrometry.
Anal Biochem, 296(2) 279-283 (2001)
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Gregory Cope, Svetlana Lyapina, Anna Shevchenko, Giovanna Serino, Tomohiko Tsuge, Chunshui Zhou, Dieter A. Wolf, Ning Wei, Andrej Shevchenko, Raymond J. Deshaies
Promotion of NEDD-CUL1 conjugate cleavage by COP9 signalosome.
Science, 292(5520) 1382-1385 (2001)
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Andrej Shevchenko, Shamil Sunyaev, Alexander Loboda, Anna Shevchenko, Peer Bork, Werner Ens, Kenneth G. Standing
Charting the proteomes of organisms with unsequenced genomes by MALDI-quadrupole time-of-flight mass spectrometry and BLAST homology searching.
Anal Chem, 73(9) 1917-1926 (2001)
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Jae Hong Seol, Anna Shevchenko, Andrej Shevchenko, Raymond J. Deshaies
Skp1 forms multiple protein complexes, including RAVE, a regulator of V-ATPase assembly.
Nat Cell Biol, 3(4) 384-391 (2001)
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Ingo Stuckmann, Anja Weigmann, Andrej Shevchenko, Matthias Mann, Wieland B. Huttner
Ephrin B1 is expressed on neuroepithelial cells in correlation with neocortical neurogenesis.
J Neurosci, 21(8) 2726-2737 (2001)
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Anna Shevchenko, Alexander Loboda, Werner Ens, Burkhart Schraven, Kenneth G. Standing, Andrej Shevchenko
Archived polyacrylamide gels as a resource for proteome characterization by mass spectrometry.
Electrophoresis, 22(6) 1194-1203 (2001)
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Carsten Janke, Jennifer Ortiz, Johannes Lechner, Anna Shevchenko, Andrej Shevchenko, Maria M. Magiera, C Schramm, E Schiebel
The budding yeast proteins Spc24p and Spc25p interact with Ndc80p and Nuf2p at the kinetochore and are important for kinetochore clustering and checkpoint control.
EMBO J, 20(4) 777-791 (2001)