Welcome to the GitLab page of the Huch lab! Here you find the repositories which contain the source code developed to support our research. This page primarily contains scripts and notebooks for data analysis, including sequencing and image analysis, which were used in our published papers. We invite researchers, students, and developers to explore, contribute, and collaborate with us as we advance our scientific objectives. Your feedback and contributions are invaluable in enhancing our research efforts!
Some of our protocols have found their way into methods papers:
Anna Dowbaj*, Timo N Kohler*, Lucía Cordero-Espinoza, Florian Hollfelder, Meritxell Huch
Generation of liver mesenchyme and ductal cell organoid co-culture using cell self-aggregation and droplet microfluidics.
STAR Protoc, 4(2) Art. No. 102333 (2023) DOI
Zixuan Zhao*, Xinyi Chen*, Anna Dowbaj*, Aleksandra Sljukic*, Kaitlin Bratlie*, Luda Lin*, Eliza Li Shan Fong, Gowri Manohari Balachander, Zhaowei Chen, Alice Soragni, Meritxell Huch#, Yi Arial Zeng#, Qun Wang#, Hanry Yu#
Organoids
Nat Rev Methods Primers, 2 Art. No. 94 (2022) DOI
Laura Broutier, Amanda Andersson-Rolf, Christopher J Hindley, Sylvia F Boj, Hans Clevers, Bon-Kyoung Koo, Meritxell Huch
Culture and establishment of self-renewing human and mouse adult liver and pancreas 3D organoids and their genetic manipulation.
Nat Protoc, 11(9) 1724-1743 (2016) DOI