Scientific Advisory Boards are the main instrument used by the Max Planck Society for the regular evaluation of its research facilities. The Scientific Advisory Board is composed of internationally recognized scientists and it functions as an external advisory committee regarding the scientific performance and administrative development of the Institute. The Scientific Advisory Board evaluates the work of the Institute every three years.

The Board of Trustees supports the Institute and fosters links between the public and the MPI-CBG. The members of the Board of Trustees are representatives from the local politics, industry, science, and the media, and they are appointed by the President of the Max Planck Society. The Board meets once a year at the Institute and the Managing Director reports about news, outreach activities and latest developments in general.