MPI-CBG: Publications

POSTDOC PROGRAM

Postdoc Publications

To search through the MPI-CBG publications click here.

^* joined first author ^# joined corresponding author

2021

Natalie Dye^✳︎^#, Marko Popovic^✳︎, K Venkatesan Iyer, Jana Fuhrmann, Romina Piscitello-Gómez, Suzanne Eaton, Frank Jülicher^#
Self-organized patterning of cell morphology via mechanosensitive feedback.
Elife, 10 Art. No. e57964 (2021)
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K Venkatesan Iyer^#, Anna Taubenberger, Salma A Zeidan, Natalie Dye, Suzanne Eaton, Frank Jülicher^#
Apico-basal cell compression regulates Lamin A/C levels in epithelial tissues.
Nat Commun, 12(1) Art. No. 1756 (2021)
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Benjamin Dalton, Ivo F. Sbalzarini, Itsuo Hanasaki
Fundamentals of the logarithmic measure for revealing multimodal diffusion.
Biophys J, 120(5) 829-843 (2021)
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Lennart Hilbert, Yuko Sato, Ksenia Kuznetsova, Tommaso Bianucci, Hiroshi Kimura, Frank Jülicher, Alf Honigmann, Vasily Zaburdaev, Nadine Vastenhouw
Transcription organizes euchromatin via microphase separation.
Nat Commun, 12(1) Art. No. 1360 (2021)
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Tingting Fu, Oskar Knittelfelder, Olivier Geffard, Yohann Clément, Eric Testet, Nicolas Elie, David Touboul, Khedidja Abbaci, Andrej Shevchenko, Jerome Lemoine, Arnaud Chaumot, Arnaud Salvador, Davide Degli-Esposti, Sophie Ayciriex
Shotgun lipidomics and mass spectrometry imaging unveil diversity and dynamics in Gammarus fossarum lipid composition.
iScience, 24(2) Art. No. 102115 (2021)
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Georg Krainer, Timothy J Welsh, Jerelle A Joseph, Jorge R Espinosa, Sina Wittmann, Ella de Csilléry, Akshay Sridhar, Zenon Toprakcioglu, Giedre Gudiškytė, Magdalena A Czekalska, William E Arter, Jordina Guillén-Boixet, Titus Franzmann, Seema Qamar, Peter St George-Hyslop, Anthony Hyman, Rosana Collepardo-Guevara, Simon Alberti, Tuomas P J Knowles
Reentrant liquid condensate phase of proteins is stabilized by hydrophobic and non-ionic interactions.
Nat Commun, 12(1) Art. No. 1085 (2021)
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Dimitri Eigel, Romy Schuster, Max J Männel, Julian Thiele, Martyna J Panasiuk, Laura C Andreae, Carmine Varricchio, Andrea Brancale, Petra B Welzel, Wieland Huttner, Carsten Werner, Ben Newland^#, Katherine S. Long^#
Sulfonated cryogel scaffolds for focal delivery in ex-vivo brain tissue cultures.
Biomaterials, 271 Art. No. 120712 (2021)
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Guido van Mierlo^#, Jurriaan R G Jansen, Jie Wang, Ina Poser, Simon J van Heeringen^#, Michiel Vermeulen^#
Predicting protein condensate formation using machine learning.
Cell Rep, 34(5) Art. No. 108705 (2021)
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Veronica Diez, Sofia Traikov, Kathrin Schmeisser, Akshay Kumar Das Adhikari, Teymuras V. Kurzchalia
Glycolate combats massive oxidative stress by restoring redox potential in Caenorhabditis elegans.
Commun Biol, 4(1) Art. No. 151 (2021)
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Arnaud Rondelet^✳︎, Andrei I. Pozniakovsky^✳︎, Devika Namboodiri, Richard Cardoso da Silva, Divya Singh, Marit Leuschner, Ina Poser, Andrea Ssykor, Julian Berlitz, Nadine Schmidt, Lea Röhder, Gerben Vader, Anthony Hyman, Alexander W. Bird
ESI mutagenesis: a one-step method for introducing mutations into bacterial artificial chromosomes.
Life Sci Alliance, 4(2) Art. No. e202000836 (2021)
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Sarita Hebbar^✳︎, Malte Lehmann^✳︎, Sarah Behrens, Catrin Hälsig, Weihua Leng, Michaela Yuan, Sylke Winkler, Elisabeth Knust
Mutations in the splicing regulator Prp31 lead to retinal degeneration in Drosophila.
Biol Open, 10(1) Art. No. bio052332 (2021)
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Srija Bhagavatula
First person - Srija Bhagavatula.
J Cell Sci, 134(2) Art. No. jcs258327 (2021)
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Gabriella Shull, Christiane Haffner, Wieland Huttner, Elena Taverna^#, Suhasa B Kodandaramaiah^#
Manipulation of Single Neural Stem Cells and Neurons in Brain Slices using Robotic Microinjection.
J Vis Exp, (167) Art. No. doi: 10.3791/61599 (2021)
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Keisuke Ishihara, Franziska Decker, Paulo Caldas, James F. Pelletier, Martin Loose, Jan Brugués, Timothy J. Mitchison
Spatial Variation of Microtubule Depolymerization in Large Asters.
Mol Biol Cell, Art. No. mbcE20110723 (2021)
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Michael Hecht, Krzysztof Gonciarz, Szabolcs Horvat
Tight Localizations of Feedback Sets.
ACM J. Exp. Algorithmics, 26(1) Art. No. 1.5 (2021)
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Lydie Flasse^#, Coline Schewin, Anne Grapin-Botton^#
Pancreas morphogenesis: Branching in and then out.
Curr. Top. Dev. Biol., 143 75-110 (2021)
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Mengfei Gao^✳︎, Ria Thielhorn^✳︎, Jakob Rentsch, Alf Honigmann, Helge Ewers
Expansion STED microscopy (ExSTED).
Methods Cell Biol, 161 15-31 (2021)
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2020

Louise Jawerth, Elisabeth Fischer-Friedrich, Suropriya Saha, Jie Wang, Titus Franzmann, Xiaojie Zhang, Jenny Sachweh, Martine Ruer, Mahdiye Ijavi, Shambaditya Saha, Julia Mahamid, Anthony Hyman^#, Frank Jülicher^#
Protein condensates as aging Maxwell fluids.
Science, 370(6522) 1317-1323 (2020)
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André Scholich, Simon Syga, Hernán Morales-Navarrete, Fabián Segovia-Miranda, Hidenori Nonaka, Kirstin Meyer, Walter de Back, Lutz Brusch, Yannis Kalaidzidis, Marino Zerial, Frank Jülicher, Benjamin Friedrich
Quantification of nematic cell polarity in three-dimensional tissues.
PLoS Comput Biol, 16(12) Art. No. 1008412 (2020)
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Tracy A Bedrosian^✳︎, Judith Houtman^✳︎, Juan Sebastian Eguiguren, Saeed Ghassemzadeh, N Rund, Nicole M Novaresi, Lauren Hu, Sarah L Parylak, Ahmet M Denli, Lynne Randolph-Moore, Takashi Namba, Fred H Gage, Tomohisa Toda
Lamin B1 decline underlies age-related loss of adult hippocampal neurogenesis.
EMBO J, 40(3) Art. No. e105819 (2020)
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Ivona Mateska, Kareena Nanda, Natalie Dye, Vasileia Ismini Alexaki, Suzanne Eaton
Range of SHH signaling in adrenal gland is limited by membrane contact to cells with primary cilia.
J Cell Biol, 219(12) Art. No. e201910087 (2020)
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Sarita Hebbar, Kai Schuhmann, Andrej Shevchenko, Elisabeth Knust
Hydroxylated sphingolipid biosynthesis regulates photoreceptor apical domain morphogenesis.
J Cell Biol, 219(12) Art. No. e201911100 (2020)
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Takashi Namba, Jeannette Nardelli, Pierre Gressens^#, Wieland Huttner^#
Metabolic Regulation of Neocortical Expansion in Development and Evolution.
Neuron, 109(3) 408-419 (2020)
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Elisa Maria Rieckhoff, Frederic Berndt, Maria Elsner, Stefan Golfier, Franziska Decker, Keisuke Ishihara, Jan Brugués
Spindle Scaling Is Governed by Cell Boundary Regulation of Microtubule Nucleation.
Curr Biol, 30(24) 4973-4983 (2020)
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José M Martín-Durán, Bruno C Vellutini, Ferdinand Marlétaz, Viviana Cetrangolo, Nevena Cvetesic, Daniel Thiel, Simon Henriet, Xavier Grau-Bové, Allan M Carrillo-Baltodano, Wenjia Gu, Alexandra Kerbl, Yamile Marquez, Nicolas Bekkouche, Daniel Chourrout, Jose Luis Gómez-Skarmeta, Manuel Irimia, Boris Lenhard, Katrine Worsaae, Andreas Hejnol
Conservative route to genome compaction in a miniature annelid.
Nat Ecol Evol, 5(2) 231-242 (2020)
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Akanksha Jain, Vladimir Ulman, Arghyadip Mukherjee, Mangal Prakash, Marina B Cuenca, Lokesh G Pimpale, Stefan Münster, Robert Haase, Kristen A Panfilio, Florian Jug, Stephan W. Grill, Pavel Tomancak^#, Anastasios Pavlopoulos^#
Regionalized tissue fluidization is required for epithelial gap closure during insect gastrulation.
Nat Commun, 11(1) Art. No. 5604 (2020)
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Elisa Nerli, Mauricio Rocha-Martins, Caren Norden
Asymmetric neurogenic commitment of retinal progenitors involves Notch through the endocytic pathway.
Elife, 9 Art. No. e60462 (2020)
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Barbara Stepien, Ronald Naumann, Anja Holtz, Jussi Helppi, Wieland Huttner, Samir Vaid
Lengthening Neurogenic Period during Neocortical Development Causes a Hallmark of Neocortex Expansion.
Curr Biol, 30(21) 4227-4237 (2020)
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Gabriel Matos-Rodrigues, Pedro B Tan, Mauricio Rocha-Martins, Clara F Charlier, Anielle L Gomes, Felipe Cabral-Miranda, Paulius Grigaravicius, Thomas G Hofmann, Pierre-Olivier Frappart, Rodrigo Martins
Progenitor death drives retinal dysplasia and neuronal degeneration in a mouse model of ATRIP-Seckel syndrome.
Dis Model Mech, 13(10) Art. No. dmm045807 (2020)
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Lei Xing, Nereo Kalebic, Takashi Namba, Samir Vaid, Pauline Wimberger, Wieland Huttner
Serotonin Receptor 2A Activation Promotes Evolutionarily Relevant Basal Progenitor Proliferation in the Developing Neocortex.
Neuron, 108(6) 1113-1129 (2020)
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Stephanie Spannl^#, Tomasz Buhl, Ioannis Nellas, Salma A Zeidan, K Venkatesan Iyer, Helena Khaliullina, Carsten Schultz, André Nadler, Natalie Dye^#, Suzanne Eaton
Glycolysis regulates Hedgehog signalling via the plasma membrane potential.
EMBO J, 39(21) Art. No. e101767 (2020)
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Debayan Saha, Uwe Schmidt, Qinrong Zhang, Aurelien Barbotin, Qi Hu, Na Ji, Martin J. Booth, Martin Weigert^#, Eugene W Myers^#
Practical sensorless aberration estimation for 3D microscopy with deep learning.
Opt express, 28(20) 29044-29053 (2020)
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Racha Chouaib, Adham Safieddine, Xavier Pichon, Arthur Imbert, Oh Sung Kwon, Aubin Samacoits, Abdel-Meneem Traboulsi, Marie-Cécile Robert, Nikolay Tsanov, Emeline Coleno, Ina Poser, Christophe Zimmer, Anthony Hyman, Hervé Le Hir, Kazem Zibara, Matthias Peter, Florian Mueller, Thomas Walter, Edouard Bertrand
A Dual Protein-mRNA Localization Screen Reveals Compartmentalized Translation and Widespread Co-translational RNA Targeting.
Dev Cell, 54(6) 773-791 (2020)
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Grzegorz Chwastek, Michal Surma, Sandra Rizk, Daniel Grosser, Oksana Lavrynenko, Magdalena Rucińska, Helena Jambor, James Sáenz
Principles of Membrane Adaptation Revealed through Environmentally Induced Bacterial Lipidome Remodeling.
Cell Rep, 32(12) Art. No. 108165 (2020)
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Kamran Hosseini, Leon Sbosny, Ina Poser, Elisabeth Fischer-Friedrich
Binding Dynamics of α-Actinin-4 in Dependence of Actin Cortex Tension.
Biophys J, 119(6) 1091-1107 (2020)
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Hamid Reza Nejabati, Kathrin Schmeisser, Vahideh Shahnazi, Deniz Samimifar, Yousef Faridvand, Zahra Bahrami-Asl, Nazila Fathi-Maroufi, Saba Nikanfar, Mohammad Nouri
N1-Methylnicotinamide: An Anti-Ovarian Aging Hormetin?
Ageing Res Rev, 62 Art. No. 101131 (2020)
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Gautam Dey, Sian Culley, Scott Curran, Uwe Schmidt, Ricardo Henriques, Wanda Kukulski, Buzz Baum
Closed mitosis requires local disassembly of the nuclear envelope.
Nature, 585(7823) 119-123 (2020)
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Juliana G. Roscito, Kaushikaram Subramanian, Ronald Naumann, Mihail Sarov, Anna Shevchenko, Aliona Bogdanova, Thomas Kurth, Leo Foerster, Moritz Kreysing, Michael Hiller
Recapitulating evolutionary divergence in a single cis-regulatory element is sufficient to cause expression changes of the lens gene Tdrd7.
Mol Biol Evol, 38(2) 380-392 (2020)
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Nereo Kalebic^#, Wieland Huttner^#
Basal Progenitor Morphology and Neocortex Evolution.
Trends Neurosci., 43(11) 843-853 (2020)
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Laura Christin Trautenberg, Oskar Knittelfelder, Carla Hofmann, Andrej Shevchenko, Marko Brankatschk, Elodie Prince
How to use the development of individual Drosophila larvae as a metabolic sensor.
J. Insect Physiol., 126 Art. No. 104095 (2020)
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Nandini Asokan, Stephan Daetwyler, Stefanie N Bernas, Christopher Schmied, Steffen Vogler, Katrin Lambert, Manja Wobus, Martin Wermke, Gerd Kempermann, Jan Huisken, Michael Brand, Martin Bornhäuser
Long-term in vivo imaging reveals tumor-specific dissemination and captures host tumor interaction in zebrafish xenografts.
Sci Rep, 10(1) Art. No. 13254 (2020)
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Quentin Vagne^✳︎, Jean-Patrick Vrel^✳︎, Pierre Sens
A minimal self-organisation model of the Golgi apparatus.
Elife, 9 Art. No. e47318 (2020)
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Keisuke Ishihara^#, Ashish B George, Ryan Cornelius, Kirill S Korolev^#
Traveling fronts in self-replicating persistent random walks with multiple internal states.
New J Phys, 22(8) Art. No. 083034 (2020)
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Michael Heide^#, Christiane Haffner, Ayako Y Murayama, Yoko Kurotaki, Haruka Shinohara, Hideyuki Okano, Erika Sasaki, Wieland Huttner^#
Human-specific ARHGAP11B increases size and folding of primate neocortex in the fetal marmoset.
Science, 369(6503) 546-550 (2020)
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David Jebb^✳︎, Zixia Huang^✳︎, Martin Pippel^✳︎, Graham M Hughes, Ksenia Lavrichenko, Paolo Devanna, Sylke Winkler, Lars S Jermiin, Emilia C Skirmuntt, Aris Katzourakis, Lucy Burkitt-Gray, David A Ray, Kevin F. Sullivan, Juliana G. Roscito, Bogdan Kirilenko, Liliana M Dávalos, Angelique P Corthals, Megan L Power, Gareth Jones, Roger D Ransome, Dina K N Dechmann, Andrea G Locatelli, Sébastien J Puechmaille, Olivier Fedrigo, Erich D Jarvis, Michael Hiller^#, Sonja Vernes^#, Eugene W Myers^#, Emma Teeling^#
Six reference-quality genomes reveal evolution of bat adaptations.
Nature, 583(7817) 578-584 (2020)
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David Oriola, Frank Jülicher^#, Jan Brugués^#
Active forces shape the metaphase spindle through a mechanical instability.
Proc Natl Acad Sci U.S.A., 117(28) 16154-16159 (2020)
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Bharath Kumar Raghuraman^✳︎, Sarita Hebbar^✳︎, Mukesh Kumar, HongKee Moon, Ian Henry, Elisabeth Knust, Andrej Shevchenko
Absolute Quantification of Proteins in the Eye of Drosophila melanogaster.
Proteomics, 20(23) Art. No. e1900049 (2020)
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Virag Sharma, Nikolai Hecker, Felix Walther, Heiko Stuckas, Michael Hiller
Convergent Losses of TLR5 Suggest Altered Extracellular Flagellin Detection in Four Mammalian Lineages.
Mol Biol Evol, 37(7) 1847-1854 (2020)
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Samir Vaid^#, Wieland Huttner^#
Transcriptional Regulators and Human-Specific/Primate-Specific Genes in Neocortical Neurogenesis.
Int J Mol Sci, 21(13) Art. No. 4614 (2020)
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Veera Raghavan Thangapandi, Oskar Knittelfelder, Mario Brosch, Eleonora Patsenker, Olga Vvedenskaya, Stephan Buch, Sebastian Hinz, Alexander Hendricks, Marina Nati, Alexander Herrmann, Devavrat Ravindra Rekhade, Thomas Berg, Madlen Matz-Soja, Klaus Huse, Edda Klipp, Josch K Pauling, Judith Ah Wodke, Jacobo Miranda Ackerman, Malte von Bonin, Elmar Aigner, Christian Datz, Witigo von Schönfels, Sophie Nehring, Sebastian Zeissig, Christoph Röcken, Andreas Dahl, Trian Chavakis, Felix Stickel, Andrej Shevchenko, Clemens Schafmayer, Jochen Hampe, Pallavi Subramanian
Loss of hepatic Mboat7 leads to liver fibrosis.
Gut, 70 940-950 (2020)
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Alice Cezanne, Janelle Lauer, Anastasia Solomatina, Ivo F. Sbalzarini, Marino Zerial
A non-linear system patterns Rab5 GTPase on the membrane.
Elife, 9 Art. No. e54434 (2020)
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Stella Finkelstein^✳︎, Sidney M Gospe^✳︎, Kai Schuhmann, Andrej Shevchenko, Vadim Y Arshavsky, Ekaterina S Lobanova
Phosphoinositide Profile of the Mouse Retina.
Cells, 9(6) Art. No. E1417 (2020)
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Alexandra Lewis, Ahmet C Berkyurek, Andre Greiner, Ahilya N Sawh, Ajay A Vashisht, Stephanie Merrett, Mathieu N Flamand, James Wohlschlegel, Mihail Sarov, Eric A Miska, Thomas F Duchaine
A Family of Argonaute-Interacting Proteins Gates Nuclear RNAi.
Mol Cell, 78(5) 862-875 (2020)
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Jens Karschau, André Scholich, Jonathan Wise, Hernán Morales-Navarrete, Yannis Kalaidzidis, Marino Zerial, Benjamin Friedrich
Resilience of three-dimensional sinusoidal networks in liver tissue.
PLoS Comput Biol, 16(6) Art. No. e1007965 (2020)
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Michael Heide^#, Wieland B. Huttner^#
Grundlagen und Mechanismen der Neocortex-Expansion.
BIOspektrum, 26(4) 393-397 (2020)

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Lydie Flasse^#, Siham Yennek, Cédric Cortijo, Irene Seijo Barandiaran, Marine R-C Kraus, Anne Grapin-Botton^#
Apical Restriction of the Planar Cell Polarity Component VANGL in Pancreatic Ducts Is Required to Maintain Epithelial Integrity.
Cell Rep, 31(8) Art. No. 107677 (2020)
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Aniruddha Mitra, Laura Meißner, Rojapriyadharshini Gandhimathi, Roman Renger, Felix Ruhnow, Stefan Diez
Kinesin-14 motors drive a right-handed helical motion of antiparallel microtubules around each other.
Nat Commun, 11(1) Art. No. 2565 (2020)
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Christiane Iserman, Christine Desroches Altamirano, Ceciel Jegers, Ulrike Friedrich, Taraneh Zarin, Anatol Fritsch, Matthäus Mittasch, Antonio Domingues, Lena Hersemann, Marcus Jahnel, Doris Richter, Ulf-Peter Guenther, Matthias W. Hentze, Alan M Moses, Anthony Hyman, Günter Kramer, Moritz Kreysing, Titus Franzmann, Simon Alberti
Condensation of Ded1p Promotes a Translational Switch from Housekeeping to Stress Protein Production.
Cell, 181(4) 818-831 (2020)
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Nereo Kalebic^#, Barbara Langen, Jussi Helppi, Hiroshi Kawasaki, Wieland Huttner^#
In Vivo Targeting of Neural Progenitor Cells in Ferret Neocortex by In Utero Electroporation.
J Vis Exp, (159) Art. No. e61171 (2020)
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Jordina Guillén-Boixet^✳︎, Andrii Kopach^✳︎, Alex S Holehouse, Sina Wittmann, Marcus Jahnel, Raimund Schlüßler, Kyoohyun Kim, Irmela Trussina, Jie Wang, Daniel Mateju, Ina Poser, Shovamayee Maharana, Martine Ruer-Gruß, Doris Richter, Xiaojie Zhang, Young-Tae Chang, Jochen Guck, Alf Honigmann, Julia Mahamid, Anthony Hyman, Rohit V Pappu, Simon Alberti, Titus Franzmann
RNA-Induced Conformational Switching and Clustering of G3BP Drive Stress Granule Assembly by Condensation.
Cell, 181(2) 346-361 (2020)
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Ayse Güven, Nereo Kalebic, Katherine S. Long, Marta Florio, Samir Vaid, Holger Brandl, Denise Stenzel, Wieland Huttner
Extracellular matrix-inducing Sox9 promotes both basal progenitor proliferation and gliogenesis in developing neocortex.
Elife, 9 Art. No. e49808 (2020)
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Alexander Krull, Peter Hirsch, Carsten Rother, Augustin Schiffrin, C Krull
Artificial-intelligence-driven scanning probe microscopy
Communications Physics, 3(1) Art. No. 54 (2020)
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Sider Penkov^✳︎, Bharath Kumar Raghuraman^✳︎, Cihan Erkut, Jana Oertel, Roberta Galli, Eduardo Jacobo Miranda Ackerman, Daniela Vorkel, Jean-Marc Verbavatz, Edmund Koch, Karim Fahmy, Andrej Shevchenko, Teymuras V. Kurzchalia
A metabolic switch regulates the transition between growth and diapause in C. elegans.
BMC Biol, 18(1) Art. No. 31 (2020)
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Oskar Knittelfelder, Elodie Prince, Susanne Sales, Eric Fritzsche, Thomas Wöhner, Marko Brankatschk, Andrej Shevchenko
Sterols as dietary markers for Drosophila melanogaster.
Biochim Biophys Acta Mol Cell Biol Lipids, 1865(7) Art. No. 158683 (2020)
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Takashi Namba^#, Judit Dóczi, Anneline Pinson, Lei Xing, Nereo Kalebic, Michaela Wilsch-Bräuninger, Katherine S. Long, Samir Vaid, Janelle Lauer, Aliona Bogdanova, Barbara Borgonovo, Anna Shevchenko, Patrick Keller, David N. Drechsel, Teymuras V. Kurzchalia, Pauline Wimberger, Christos Chinopoulos, Wieland Huttner^#
Human-Specific ARHGAP11B Acts in Mitochondria to Expand Neocortical Progenitors by Glutaminolysis.
Neuron, 105(5) 867-881 (2020)
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Ritika Giri, Dimitrios Papadopoulos, Diana M Posadas, Hemanth K Potluri, Pavel Tomancak, Madhav Mani^#, Richard W Carthew^#
Ordered patterning of the sensory system is susceptible to stochastic features of gene expression.
Elife, 9 Art. No. e53638 (2020)
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Laia Leria, Miquel Vila-Farré, Marta Álvarez-Presas, Alejandro Sánchez-Gracia, Julio Rozas, Ronald Sluys, Marta Riutort
Cryptic species delineation in freshwater planarians of the genus Dugesia (Platyhelminthes, Tricladida): Extreme intraindividual genetic diversity, morphological stasis, and karyological variability.
Mol. Phylogenet. Evol., 143 Art. No. 106496 (2020)
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Kirstin Meyer, Hernán Morales-Navarrete, Sarah Seifert, Michaela Wilsch-Braeuninger, Uta Dahmen, Elly M. Tanaka, Lutz Brusch, Yannis Kalaidzidis, Marino Zerial
Bile canaliculi remodeling activates YAP via the actin cytoskeleton during liver regeneration.
Mol Syst Biol, 16(2) Art. No. e8985 (2020)
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Satu Kujawski^✳︎, Catia Crespo^✳︎, Marta Luz, Michaela Yuan, Sylke Winkler, Elisabeth Knust
Loss of Crb2b-lf leads to anterior segment defects in old zebrafish.
Biol Open, 9(2) Art. No. bio.047555 (2020)
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Adam Klosin^✳︎, F Oltsch^✳︎, T Harmon, Alf Honigmann, Frank Jülicher^#, Anthony A. Hyman^#, Christoph Zechner^#
Phase separation provides a mechanism to reduce noise in cells.
Science, 367(6476) 464-468 (2020)
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Priyanka Sharma, Sameena Parveen, Lekha V Shah, Madhumita Mukherjee, Yannis Kalaidzidis, Anthony J Kozielski, Roberto Rosato, Jenny C Chang, Sunando Datta
SNX27-retromer assembly recycles MT1-MMP to invadopodia and promotes breast cancer metastasis.
J Cell Biol, 219(1) Art. No. e201812098 (2020)
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Lei Xing^#, Wieland Huttner^#
Neurotransmitters as Modulators of Neural Progenitor Cell Proliferation During Mammalian Neocortex Development.
Front Cell Dev Biol, 8 Art. No. 391 (2020)
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Virag Sharma, Michael Hiller
Losses of human disease-associated genes in placental mammals
NAR Genomics and Bioinformatics, 2(1) Art. No. lqz012 (2020)
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Edlyn Wu, Nadine Vastenhouw
From mother to embryo: A molecular perspective on zygotic genome activation.
Curr. Top. Dev. Biol., 140 209-254 (2020)
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Robert Haase^✳︎, Loic Royer^✳︎, Peter Steinbach, Deborah Schmidt, Alexandr Dibrov, Uwe Schmidt, Martin Weigert, Nicola Maghelli, Pavel Tomancak, Florian Jug, Eugene W Myers
CLIJ: GPU-accelerated image processing for everyone.
Nat Methods, 17(1) 5-6 (2020)
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Yuko Gonda, Takashi Namba, Carina Hanashima
Beyond Axon Guidance: Roles of Slit-Robo Signaling in Neocortical Formation.
Front Cell Dev Biol, 8 Art. No. 607415 (2020)
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Martin Pippel^✳︎, David Jebb^✳︎, Franziska Patzold, Sylke Winkler, Heiko Vogel, Gene Myers, Michael Hiller^#, Anna K Hundsdoerfer^#
A highly contiguous genome assembly of the bat hawkmoth Hyles vespertilio (Lepidoptera: Sphingidae).
GigaScience, 9(1) Art. No. giaa001 (2020)
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Nikolai Hecker, Michael Hiller
A genome alignment of 120 mammals highlights ultraconserved element variability and placenta-associated enhancers.
GigaScience, 9(1) Art. No. giz159 (2020)
DOI

2019

Gopi Shah, Konstantin Thierbach, Benjamin Schmid, Jens Waschke, Anna Reade, Mario Hlawitschka, Ingo Roeder, Nico Scherf, Jan Huisken
Multi-scale imaging and analysis identify pan-embryo cell dynamics of germlayer formation in zebrafish.
Nat Commun, 10(1) Art. No. 5753 (2019)
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Ekaterina S Lobanova^#, Kai Schuhmann, Stella Finkelstein, Tylor R Lewis, Martha A Cady, Ying Hao, Casey Keuthan, John D Ash, Marie E Burns, Andrej Shevchenko, Vadim Y Arshavsky^#
Disrupted Blood-Retina Lysophosphatidylcholine Transport Impairs Photoreceptor Health But Not Visual Signal Transduction.
J Neurosci, 39(49) 9689-9701 (2019)
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Tatsunori Seki, Tomokatsu Hori, Hajime Miyata, Michiyo Maehara, Takashi Namba
Analysis of proliferating neuronal progenitors and immature neurons in the human hippocampus surgically removed from control and epileptic patients.
Sci Rep, 9(1) Art. No. 18194 (2019)
DOI

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Convergent gene losses illuminate metabolic and physiological changes in herbivores and carnivores.
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K Venkatesan Iyer^#, Romina Piscitello-Gómez, Joris Paijmans, Frank Jülicher^#, Suzanne Eaton^#
Epithelial Viscoelasticity Is Regulated by Mechanosensitive E-cadherin Turnover.
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The apical protein Apnoia interacts with Crumbs to regulate tracheal growth and inflation.
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Andrei Rozanski, HongKee Moon, Holger Brandl, José M Martín-Durán, Markus Grohme, Katja Hüttner, Kerstin Bartscherer, Ian Henry, Jochen Rink
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Egon Deyaert, Margaux Leemans, Ranjan Kumar Singh, Rodrigo Gallardo, Jan Steyaert, Arjan Kortholt, Janelle Lauer^#, Wim Versées^#
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The BEACH Domain Is Critical for Blue Cheese Function in a Spatial and Epistatic Autophagy Hierarchy.
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Reinvestigating the early embryogenesis in the flatworm Maritigrella crozieri highlights the unique spiral cleavage program found in polyclad flatworms.
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Coding Exon-Structure Aware Realigner (CESAR): Utilizing Genome Alignments for Comparative Gene Annotation.
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Louise Jawerth, Mahdiye Ijavi, Martine Ruer, Shambaditya Saha, Marcus Jahnel, Anthony A. Hyman, Frank Jülicher^#, Elisabeth Fischer-Friedrich^#
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The genome of the tegu lizard Salvator merianae: combining Illumina, PacBio, and optical mapping data to generate a highly contiguous assembly.
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Björn Langer, Juliana G. Roscito, Michael Hiller
REforge Associates Transcription Factor Binding Site Divergence in Regulatory Elements with Phenotypic Differences between Species.
Mol Biol Evol, 35(12) 3027-3040 (2018)
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Virag Sharma, Michael Hiller
Loss of Enzymes in the Bile Acid Synthesis Pathway Explains Differences in Bile Composition among Mammals.
Genome Biol Evol, 10(12) 3211-3217 (2018)
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Martin Weigert, Uwe Schmidt, Tobias Boothe, Andreas Müller, Alexandr Dibrov, Akanksha Jain, Benjamin Wilhelm, Deborah Schmidt, Coleman Broaddus, Sian Culley, Mauricio Rocha-Martins, Fabián Segovia-Miranda, Caren Norden, Ricardo Henriques, Marino Zerial, Michele Solimena, Jochen Rink, Pavel Tomancak, Loic Royer, Florian Jug, Eugene W Myers
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Nereo Kalebic, Carlotta Gilardi, Mareike Albert, Takashi Namba, Katherine S. Long, Milos Kostic, Barbara Langen, Wieland Huttner
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Pavel Vopalensky, Sabrina Pralow, Nadine Vastenhouw
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Giorgos Tsoumpekos, Linda Nemetschke, Elisabeth Knust
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Matthäus Mittasch, Peter Gross, Michael Nestler, Anatol W Fritsch, Christiane Iserman, Mrityunjoy Kar, Matthias Munder, Axel Voigt, Simon Alberti, Stephan W. Grill, Moritz Kreysing
Non-invasive perturbations of intracellular flow reveal physical principles of cell organization.
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Patrick Rockenfeller, Martin Smolnig, Jutta Diessl, Mina Bashir, Vera Schmiedhofer, Oskar Knittelfelder, Julia Ring, Joakim Franz, Ines Foessl, M Khan, René Rost, Wolfgang F Graier, Guido Kroemer, Andreas Zimmermann, Didac Carmona-Gutierrez, Tobias Eisenberg, Sabrina Büttner, Stephan J Sigrist, Ronald P Kühnlein, Sepp D Kohlwein, Campbell W Gourlay, Frank Madeo
Diacylglycerol triggers Rim101 pathway-dependent necrosis in yeast: a model for lipotoxicity.
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Santosh Phuyal, Mayes Kasem, Oskar Knittelfelder, Animesh Sharma, Davi de Miranda Fonseca, Vaineta Vebraite, Sergey Shaposhnikov, Geir Slupphaug, Vidar Skaug, Shanbeh Zienolddiny
Characterization of the proteome and lipidome profiles of human lung cells after low dose and chronic exposure to multiwalled carbon nanotubes.
Nanotoxicology, 12(2) 138-152 (2018)
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FoSheng Hsu, Stephanie Spannl, Charles Ferguson, Anthony Hyman, Robert G. Parton, Marino Zerial
Rab5 and Alsin regulate stress-activated cytoprotective signaling on mitochondria.
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Lara Marrone, Ina Poser, Ian Casci, Julia Japtok, Peter Reinhardt, Antje Janosch, Cordula Andree, Hyun-Ok Kate Lee, Claudia Moebius, Ellen Koerner, Lydia Reinhardt, Maria Elena Cicardi, Karl Hackmann, Barbara Klink, Angelo Poletti, Simon Alberti, Marc Bickle, Andreas Hermann, Udai Pandey, Anthony Hyman, Jared Sterneckert
Isogenic FUS-eGFP iPSC Reporter Lines Enable Quantification of FUS Stress Granule Pathology that Is Rescued by Drugs Inducing Autophagy.
Stem Cell Reports, 10(2) 375-389 (2018)
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J P Joos, A R Saadatmand, C Schnabel, Ivana Viktorinová, Thomas Brand, M Kramer, S Nattel, D Dobrev, Pavel Tomancak, J Backs, P Kleinbongard, G Heusch, K Lorenz, E Koch, S Weber, A El-Armouche
Ectopic expression of S28A-mutated Histone H3 modulates longevity, stress resistance and cardiac function in Drosophila.
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Ronald Sluys, Miquel Vila-Farré, Jochen Rink, John E. J. Rasko
An intriguing, new planarian species from Tasmania, with a discussion on protandry in triclad flatworms (Platyhelminthes, Tricladida)
Acta Zool, 99(4) 404-414 (2018)
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Markus Grohme^✳︎, Siegfried Schloissnig^✳︎, Andrei Rozanski, Martin Pippel, George Robert Young, Sylke Winkler, Holger Brandl, Ian Henry, Andreas Dahl, Sean Powell, Michael Hiller, Eugene Myers, Jochen Rink
The genome of Schmidtea mediterranea and the evolution of core cellular mechanisms.
Nature, 554(7690) 56-61 (2018)
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Sergej Nowoshilow, Siegfried Schloissnig, Jifeng Fei, Andreas Dahl, Andy W C Pang, Martin Pippel, Sylke Winkler, Alex R Hastie, George Young, Juliana G. Roscito, Francisco Falcon, Dunja Knapp, Sean Powell, Alfredo Cruz, Han Cao, Bianca Habermann, Michael Hiller, Elly M. Tanaka, Eugene W Myers
The axolotl genome and the evolution of key tissue formation regulators.
Nature, 554(7690) 50-55 (2018)
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Mukesh Kumar, Shai Joseph, Martina Augsburg, Aliona Bogdanova, David N. Drechsel, Nadine Vastenhouw, Frank Buchholz, Marc Gentzel, Andrej Shevchenko
MS Western, a Method of Multiplexed Absolute Protein Quantification is a Practical Alternative to Western Blotting.
Mol Cell Proteomics, 17(2) 384-396 (2018)
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Marcel Naumann, Arun Pal, Anand Goswami, Xenia Lojewski, Julia Japtok, Anne Vehlow, Maximilian Naujock, René Günther, Mengmeng Jin, Nancy Stanslowsky, Peter Reinhardt, Jared Sterneckert, Marie Frickenhaus, Francisco Pan-Montojo, Erik Storkebaum, Ina Poser, Axel Freischmidt, Jochen H Weishaupt, Karlheinz Holzmann, Dirk Troost, Albert C Ludolph, Tobias M Boeckers, Stefan Liebau, Susanne Petri, Nils Cordes, Anthony Hyman, Florian Wegner, Stephan W. Grill, Joachim Weis, Alexander Storch, Andreas Hermann
Impaired DNA damage response signaling by FUS-NLS mutations leads to neurodegeneration and FUS aggregate formation.
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Rana Amini, Mauricio Rocha-Martins, Caren Norden
Neuronal Migration and Lamination in the Vertebrate Retina.
Front Neurosci, 11 Art. No. 742 (2018)
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Stephen Enos^✳︎, Martin Dressler^✳︎, Beatriz Ferreira Gomes, Anthony Hyman, Jeffrey Woodruff
Phosphatase PP2A and microtubule-mediated pulling forces disassemble centrosomes during mitotic exit.
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Miquel Vila-Farré, Jochen Rink
The Ecology of Freshwater Planarians.
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Markus Grohme, Miquel Vila-Farré, Jochen Rink
Small- and Large-Scale High Molecular Weight Genomic DNA Extraction from Planarians.
Methods Mol Biol, 1774 267-275 (2018)
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Titus Franzmann, Marcus Jahnel, Andrei I. Pozniakovsky, Julia Mahamid, Alex S Holehouse, Elisabeth Nüske, Doris Richter, Wolfgang Baumeister, Stephan W. Grill, Rohit V Pappu, Anthony A. Hyman^#, Simon Alberti^#
Phase separation of a yeast prion protein promotes cellular fitness.
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Alejandro Vignoni, Anna Bajur, Elisabeth Knust, Ivo F. Sbalzarini
Multi-objective identification from fluorescence recovery after photobleaching experiments: Understanding morphogenetic regulation of epithelial polarity
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Mareike Albert^#, Wieland Huttner^#
Epigenetic and Transcriptional Pre-patterning-An Emerging Theme in Cortical Neurogenesis.
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L Carine Stapel, Coleman Broaddus, Nadine Vastenhouw
Detection and Automated Analysis of Single Transcripts at Subcellular Resolution in Zebrafish Embryos.
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Olga Vvedenskaya, Yuting Wang, Jacobo Miranda Ackerman, Oskar Knittelfelder, Andrej Shevchenko
Analytical challenges in human plasma lipidomics: A winding path towards the truth
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Michael Weber^✳︎, Nico Scherf^✳︎, Alexander M Meyer, Daniela Panáková, Peter Kohl, Jan Huisken
Cell-accurate optical mapping across the entire developing heart.
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J M Wasielewska, L Grönnert, N Rund, L Donix, R Rust, Alex Sykes, A Hoppe, Axel Roers, Gerd Kempermann, T L Walker
Mast cells increase adult neural precursor proliferation and differentiation but this potential is not realized in vivo under physiological conditions.
Sci Rep, 7(1) Art. No. 17859 (2017)
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Virag Sharma, Peter Schwede, Michael Hiller
CESAR 2.0 substantially improves speed and accuracy of comparative gene annotation.
Bioinformatics, 33(24) 3985-3987 (2017)
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B Duygu Özpolat, Mette Handberg-Thorsager, Michel Vervoort, Guillaume Balavoine
Cell lineage and cell cycling analyses of the 4d micromere using live imaging in the marine annelid Platynereis dumerilii.
Elife, 6 Art. No. e30463 (2017)
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Michael Heide, Katherine Long, Wieland B. Huttner
Novel gene function and regulation in neocortex expansion.
Curr Opin Cell Biol, 49 22-30 (2017)
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Kai Schuhmann, Kristina Srzentić, Konstantin O Nagornov, Henrik Thomas, Theresia Gutmann, Ünal Coskun, Yury O Tsybin, Andrej Shevchenko
Monitoring Membrane Lipidome Turnover by Metabolic 15N Labeling and Shotgun Ultra-High-Resolution Orbitrap Fourier Transform Mass Spectrometry.
Anal Chem, 89(23) 12857-12865 (2017)
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Marcus Braun, Zdenek Lansky, Agata Szuba, Friedrich W Schwarz, Aniruddha Mitra, Mengfei Gao, Annemarie Lüdecke, Pieter Rein Ten Wolde, Stefan Diez
Changes in microtubule overlap length regulate kinesin-14-driven microtubule sliding.
Nat Chem Biol, 13(12) 1245-1252 (2017)
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Ivana Viktorinová, Ian Henry, Pavel Tomancak
Epithelial rotation is preceded by planar symmetry breaking of actomyosin and protects epithelial tissue from cell deformations.
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Birgit Plochberger, Clemens Röhrl, Johannes Preiner, Christian Rankl, Mario Brameshuber, Josef Madl, Robert Bittman, Robert Ros, Erdinc Sezgin, Christian Eggeling, Peter Hinterdorfer, Herbert Stangl, Gerhard J Schütz
HDL particles incorporate into lipid bilayers - a combined AFM and single molecule fluorescence microscopy study.
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Yusuke Toyoda, Cedric J Cattin, Martin P Stewart, Ina Poser, Mirko Theis, Teymuras V. Kurzchalia, Frank Buchholz, Anthony Hyman, Daniel J. Müller
Genome-scale single-cell mechanical phenotyping reveals disease-related genes involved in mitotic rounding.
Nat Commun, 8(1) Art. No. 1266 (2017)
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Nikolai Hecker, Virag Sharma, Michael Hiller
Transition to an Aquatic Habitat Permitted the Repeated Loss of the Pleiotropic KLK8 Gene in Mammals.
Genome Biol Evol, 9(11) 3179-3188 (2017)
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Jacob Kruse, Carsten Rother, Uwe Schmidt
Learning to Push the Limits of Efficient FFT-based Image Deconvolution
In: 2017 IEEE International Conference on Computer Vision : ICCV 2017 : proceedings : 22-29 October 2017, Venice, Italy (2017), Piscataway, N.J., IEEE (2017), 4596-4604
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Natalja Strelnikova, Nora Sauter, Manuel Guizar-Sicairos, Michael Göllner, Ana Diaz, Petrina Delivani, Mariola R. Chacón, Iva M Tolić, Vasily Zaburdaev, Thomas Pfohl
Live cell X-ray imaging of autophagic vacuoles formation and chromatin dynamics in fission yeast.
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Yadira Boada, Alejandro Vignoni, Jesús Picó
Engineered Control of Genetic Variability Reveals Interplay among Quorum Sensing, Feedback Regulation, and Biochemical Noise.
ACS Synth Biol, 6(10) 1903-1912 (2017)
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Natalie Dye, Marko Popović, Stephanie Spannl, Raphael Etournay, Dagmar Kainmüller, Suhrid Ghosh, Eugene W Myers, Frank Jülicher, Suzanne Eaton
Cell dynamics underlying oriented growth of the Drosophila wing imaginal disc.
Development, 144(23) 4406-4421 (2017)
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Simone Pigolotti, Izaak Neri, Édgar Roldán, Frank Jülicher
Generic Properties of Stochastic Entropy Production.
Phys Rev Lett, 119(14) 140604-140604 (2017)
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Martin Weigert, Loic Royer, Florian Jug, Gene Myers
Isotropic reconstruction of 3D fluorescence microscopy images using convolutional neural networks
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Cordula Reuther, Matthäus Mittasch, Sundar Naganathan, Stephan W. Grill, Stefan Diez
Highly-Efficient Guiding of Motile Microtubules on Non-Topographical Motor Patterns.
Nano Lett, 17(9) 5699-5705 (2017)
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Amayra Hernández-Vega, Marcus Braun, Lara Scharrel, Marcus Jahnel, Susanne Wegmann, Bradley T Hyman, Simon Alberti, Stefan Diez^#, Anthony Hyman^#
Local Nucleation of Microtubule Bundles through Tubulin Concentration into a Condensed Tau Phase.
Cell Rep, 20(10) 2304-2312 (2017)
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Mareike Albert^#, Nereo Kalebic, Marta Florio, Naharajan Lakshmanaperumal, Christiane Haffner, Holger Brandl, Ian Henry, Wieland B. Huttner^#
Epigenome profiling and editing of neocortical progenitor cells during development.
EMBO J, 36(17) 2642-2658 (2017)
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Sheik Pran Babu Sardar Pasha, Robert Münch, Patrick Schäfer, Peter Oertel, Alex Sykes, Yiqing Zhu, Mike Karl
Retinal cell death dependent reactive proliferative gliosis in the mouse retina.
Sci Rep, 7(1) Art. No. 9517 (2017)
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L Carine Stapel, Christoph Zechner, Nadine Vastenhouw
Uniform gene expression in embryos is achieved by temporal averaging of transcription noise.
Genes Dev, 31(16) 1635-1640 (2017)
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Corinna Blasse, Stephan Saalfeld, Raphael Etournay, Andreas Sagner, Suzanne Eaton, Eugene W Myers
PreMosa: extracting 2D surfaces from 3D microscopy mosaics.
Bioinformatics, 33(16) 2563-2569 (2017)
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Shambaditya Saha, Anthony Hyman
RNA gets in phase.
J Cell Biol, 216(8) 2235-2237 (2017)
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Tobias Boothe, Lennart Hilbert, Michael Heide, Lea Berninger, Wieland B. Huttner, Vasily Zaburdaev, Nadine Vastenhouw, Eugene W Myers, David N. Drechsel, Jochen Rink
A tunable refractive index matching medium for live imaging cells, tissues and model organisms.
Elife, 6 Art. No. e27240 (2017)
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Adam Klosin, Anthony Hyman
Molecular biology: A liquid reservoir for silent chromatin.
Nature, 547(7662) 168-170 (2017)
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Kai Schuhmann, Henrik Thomas, Jacobo Miranda Ackerman, Konstantin O Nagornov, Yury O Tsybin, Andrej Shevchenko
Intensity-Independent Noise Filtering in FT MS and FT MS/MS Spectra for Shotgun Lipidomics.
Anal Chem, 89(13) 7046-7052 (2017)
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Valentina Botti, François McNicoll, Michaela Steiner, Florian M Richter, Anfisa Solovyeva, Marius Wegener, Oliver D Schwich, Ina Poser, Kathi Zarnack, Ilka Wittig, Karla M. Neugebauer, Michaela Müller-McNicoll
Cellular differentiation state modulates the mRNA export activity of SR proteins.
J Cell Biol, 216(7) 1993-2009 (2017)
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Beata E Mierzwa, Nicolas Chiaruttini, Lorena Redondo-Morata, Joachim Moser von Filseck, Julia König, Jorge Larios, Ina Poser, Thomas Müller-Reichert, Simon Scheuring, Aurélien Roux, Daniel W Gerlich
Dynamic subunit turnover in ESCRT-III assemblies is regulated by Vps4 to mediate membrane remodelling during cytokinesis.
Nat Cell Biol, 19(7) 787-798 (2017)
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Virag Sharma, Michael Hiller
Increased alignment sensitivity improves the usage of genome alignments for comparative gene annotation.
Nucleic Acids Res, 45(14) 8369-8377 (2017)
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Djamal Belazzougui, Fabio Cunial, Travis Gagie, Nicola Prezza, Mathieu Raffinot
Flexible indexing of repetitive collections
In: Unveiling Dynamics and Complexity : 13th Conference on Computability in Europe, CiE 2017, Turku, Finland, June 12-16, 2017, Proceedings (2017)(Eds.) Jarkko Kari (Lecture Notes in Computer Science ; 10307), Cham, Springer International Publishing (2017), 162-174
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Verena Rauschenberger, Dominic B Bernkopf, Sabrina Krenn, Kowcee Jalal, Jens Heller, Jürgen Behrens, Marc Gentzel, Alexandra Schambony
The phosphatase Pgam5 antagonizes Wnt/β-Catenin signaling in embryonic anterior-posterior axis patterning.
Development, 144(12) 2234-2247 (2017)
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Dmitrij Schlesinger^✳︎, Florian Jug^✳︎, Gene Myers, Carsten Rother, Dagmar Kainmueller
Crowd Sourcing Image Segmentation with iaSTAPLE
In: 14th. IEEE International Symposium on Biomedical Imaging: From Nano to Macro ; ISBI 2017 ; Proceedings (2017)(Eds.) Garry Egan, Piscataway, N.J., IEEE (2017), 401-405
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Patricia Heyn, Hanna Salmonowicz, Jonathan Rodenfels, Karla M. Neugebauer
Activation of transcription enforces the formation of distinct nuclear bodies in zebrafish embryos.
RNA Biol, 14(6) 752-760 (2017)
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Carlos Ocaña-Morgner, Susanne Sales, Manuela Rothe, Andrej Shevchenko, Rolf Jessberger
Tolerogenic versus Immunogenic Lipidomic Profiles of CD11c(+) Immune Cells and Control of Immunogenic Dendritic Cell Ceramide Dynamics.
J Immunol, 198(11) 4360-4372 (2017)
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Jeffrey Woodruff^#, Beatriz Ferreira Gomes, Per Widlund, Julia Mahamid, Alf Honigmann, Anthony Hyman^#
The Centrosome Is a Selective Condensate that Nucleates Microtubules by Concentrating Tubulin.
Cell, 169(6) 1066-1077 (2017)
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Sebastian Boland, Ulrike Schmidt, Vyacheslav Zagoriy, Julio Sampaio, Raphael F Fritsche, Regina Czerwonka, Tilo Lübken, Jakob Reimann, Sider Penkov, Hans-Joachim Knölker, Teymuras V. Kurzchalia
Phosphorylated glycosphingolipids essential for cholesterol mobilization in Caenorhabditis elegans.
Nat Chem Biol, 13(6) 647-654 (2017)
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Peter Gross, K Vijay Kumar, Stephan W. Grill
How Active Mechanics and Regulatory Biochemistry Combine to Form Patterns in Development.
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Avinash Patel^✳︎, Liliana Malinovska^✳︎, Shambaditya Saha, Jie Wang, Simon Alberti, Yamuna Krishnan^#, Anthony Hyman^#
ATP as a biological hydrotrope.
Science, 356(6339) 753-756 (2017)
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Mesut Bilgin, Andrej Shevchenko
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Nat Rev Mol Cell Biol, 18(5) 285-298 (2017)
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Shai Joseph, Máté Pálfy, Lennart Hilbert, Mukesh Kumar, Jens Karschau, Vasily Zaburdaev, Andrej Shevchenko, Nadine Vastenhouw
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Elife, 6 Art. No. e23326 (2017)
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Daniel Mateju, Titus Franzmann, Avinash Patel, Andrii Kopach, Edgar Boczek, Shovamayee Maharana, Hyun-Ok Kate Lee, Serena Carra, Anthony Hyman, Simon Alberti
An aberrant phase transition of stress granules triggered by misfolded protein and prevented by chaperone function.
EMBO J, 36(12) 1669-1687 (2017)
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John J Reynolds, Louise S Bicknell, Paula Carroll, Martin R Higgs, Ranad Shaheen, Jennie E Murray, Dimitrios Papadopoulos, Andrea Leitch, Olga Murina, Žygimantė Tarnauskaitė, Sarah R Wessel, Anastasia Zlatanou, Audrey Vernet, Alex von Kriegsheim, Rachel M A Mottram, Clare V Logan, Hannah Bye, Yun Li, Alexander Brean, Sateesh Maddirevula, Rachel C Challis, Kassiani Skouloudaki, Agaadir Almoisheer, Hessa S Alsaif, Ariella Amar, Natalie J Prescott, Michael B Bober, Angela Duker, Eissa Faqeih, Mohammed Zain Seidahmed, Saeed Al Tala, Abdulrahman Alswaid, Saleem Ahmed, Jumana Yousuf Al-Aama, Janine Altmüller, Mohammed Al Balwi, Angela F Brady, Luciana Chessa, Helen Cox, Rita Fischetto, Raoul Heller, Bertram D Henderson, Emma Hobson, Peter Nürnberg, E Ferda Percin, Angela Peron, Luigina Spaccini, Alan J Quigley, Seema Thakur, Carol A Wise, Grace Yoon, Maha Alnemer, Pavel Tomancak, Gökhan Yigit, A Malcolm R Taylor, Martin A M Reijns, Michael A Simpson, David Cortez, Fowzan Sami Alkuraya, Christopher G Mathew, Andrew P Jackson, Grant S Stewart
Mutations in DONSON disrupt replication fork stability and cause microcephalic dwarfism.
Nat Genet, 49(4) 537-549 (2017)
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Rory M Power, Jan Huisken
A guide to light-sheet fluorescence microscopy for multiscale imaging.
Nat Methods, 14(4) 360-373 (2017)
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Ines Wagner^✳︎, Heng Wang, Philipp M Weissert, Werner L Straube^✳︎, Anna Shevchenko, Marc Gentzel, Goncalo Brito, Akira Tazaki, Catarina Oliveira, Takuji Sugiura, Andrej Shevchenko, András Simon, David N. Drechsel, Elly M. Tanaka
Serum Proteases Potentiate BMP-Induced Cell Cycle Re-entry of Dedifferentiating Muscle Cells during Newt Limb Regeneration.
Dev Cell, 40(6) 608-617 (2017)
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Kirstin Meyer, Oleksandr Ostrenko, George Bourantas, Hernán Morales-Navarrete, Natalie Porat-Shliom, Fabián Segovia-Miranda, Hidenori Nonaka, Ali Ghaemi, Jean-Marc Verbavatz, Lutz Brusch, Ivo F. Sbalzarini, Yannis Kalaidzidis, Roberto Weigert, Marino Zerial
A Predictive 3D Multi-Scale Model of Biliary Fluid Dynamics in the Liver Lobule.
Cell Syst, 4(3) 277-290 (2017)
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Jarno Alanko, Fabio Cunial, Djamal Belazzougui, Veli Mäkinen
A framework for space-efficient read clustering in metagenomic samples.
BMC Bioinformatics, 18(Suppl 3) Art. No. 59 (2017)
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Sara Ciucci, Yan Ge, Claudio Durán, Alessandra Palladini, Víctor Jiménez-Jiménez, Luisa María Martínez-Sánchez, Yuting Wang, Susanne Sales, Andrej Shevchenko, Steven W Poser, Maik Herbig, Oliver Otto, Andreas Androutsellis-Theotokis, Jochen Guck, Mathias J. Gerl, Carlo Vittorio Cannistraci
Enlightening discriminative network functional modules behind Principal Component Analysis separation in differential-omic science studies.
Sci Rep, 7 Art. No. 43946 (2017)
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Matthias Merkel, Raphael Etournay, Marko Popović, Guillaume Salbreux, Suzanne Eaton, Frank Jülicher
Triangles bridge the scales: Quantifying cellular contributions to tissue deformation.
Phys Rev E, 95(3) Art. No. 032401 (2017)
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Ana Lisica, Stephan W. Grill
Optical tweezers studies of transcription by eukaryotic RNA polymerases.
Biomol Concepts, 8(1) 1-11 (2017)
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Marko Popović, Amitabha Nandi, Matthias Merkel, Raphael Etournay, Suzanne Eaton, Frank Jülicher, Guillaume Salbreux
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New J Phys, 19(3) Art. No. 033006 (2017)
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Izaak Neri, Édgar Roldán, Frank Jülicher
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Physical Review X, 7(1) Art. No. 011019 (2017)
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Stephanie Spannl^✳︎, Alexandra Kumichel^✳︎, Sarita Hebbar, Katja Kapp, Marcos Gonzalez-Gaitan, Sylke Winkler, Rosana Blawid, Gregor Jessberger, Elisabeth Knust
The Crumbs_C isoform of Drosophila shows tissue- and stage-specific expression and prevents light-dependent retinal degeneration.
Biol Open, 6(2) 165-175 (2017)
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Tom Stückemann^✳︎, James Cleland^✳︎, Steffen Werner, Hanh Thi-Kim Vu, Robert Bayersdorf, Shang-Yun Liu, Benjamin Friedrich, Frank Jülicher, Jochen Rink
Antagonistic Self-Organizing Patterning Systems Control Maintenance and Regeneration of the Anteroposterior Axis in Planarians.
Dev Cell, 40(3) 248-263 (2017)
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Steffen Werner, Hanh Thi-Kim Vu, Jochen Rink
Self-organization in development, regeneration and organoids.
Curr Opin Cell Biol, 44 102-109 (2017)
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Takashi Namba, Wieland B. Huttner
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Wiley Interdiscip Rev Dev Biol, 6(1) Art. No. e256 (2017)
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Marta Florio, Víctor Borrell, Wieland B. Huttner
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Curr Opin Neurobiol, 42 33-44 (2017)
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Marie Skogs, Charlotte Stadler, Rutger Schutten, Martin Hjelmare, Christian Gnann, Lars Björk, Ina Poser, Anthony Hyman, Mathias Uhlén, Emma Lundberg
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J Proteome Res, 16(1) 147-155 (2017)
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Stefania Tavano, Wieland B. Huttner
The Cell Biology of Neural Stem and Progenitor Cells and Neocortex Expansion in Development and Evolution
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Brief Bioinform, 18(1) 1-8 (2017)
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Anja Zeigerer, Anne Wuttke, Giovanni Marsico, Sarah Seifert, Yannis Kalaidzidis, Marino Zerial
Functional properties of hepatocytes in vitro are correlated with cell polarity maintenance.
Exp Cell Res, 350(1) 242-252 (2017)
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Yadira Boada, Alejandro Vignoni, Gilberto Reynoso-Meza, Jesús Picó
Parameter identification in synthetic biological circuits using multi-objective optimization
IFAC-PapersOnLine, 49(26) 77-82 (2016)
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Georgi Stoychev, Cordula Reuther, Stefan Diez, Leonid Ionov
Controlled Retention and Release of Biomolecular Transport Systems Using Shape-Changing Polymer Bilayers.
Angew Chem Int Ed Engl, 55(52) 16106-16109 (2016)
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Marcus Braun, Stefan Diez, Zdenek Lansky
Cell Biology: Kinesin-14 Backsteps to Organize Polymerizing Microtubules.
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Enric Picó-Marco, Yadira Boada, Jesús Picó, Alejandro Vignoni
Contractivity of a genetic circuit with internal feedback and cell-to-cell communication
IFAC-PapersOnLine, 49(26) 213-218 (2016)
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Marta Florio, Takashi Namba, Svante Pääbo, Michael Hiller, Wieland B. Huttner
A single splice site mutation in human-specific ARHGAP11B causes basal progenitor amplification
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Ilaria Visco, Carsten Hoege, Anthony Hyman, Petra Schwille
In vitro Reconstitution of a Membrane Switch Mechanism for the Polarity Protein LGL.
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Studying the Protein Quality Control System of D. discoideum Using Temperature-controlled Live Cell Imaging.
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Drosophila Crumbs prevents ectopic Notch activation in developing wings by inhibiting ligand-independent endocytosis.
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Loic Royer, William Lemon, Raghav K Chhetri, Yinan Wan, Michael Coleman, Eugene W Myers, Patrick Keller
Adaptive light-sheet microscopy for long-term, high-resolution imaging in living organisms.
Nat Biotechnol, 34(12) 1267-1278 (2016)
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Phys Rev Lett, 117(22) Art. No. 224101 (2016)
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Cordula Reuther, Alejandra Laguillo Diego, Stefan Diez
Kinesin-1 motors can increase the lifetime of taxol-stabilized microtubules.
Nat Nanotechnol, 11(11) 914-915 (2016)
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Mariola R. Chacón, Petrina Delivani, Iva M Tolić
Meiotic Nuclear Oscillations Are Necessary to Avoid Excessive Chromosome Associations.
Cell Rep, 17(6) 1632-1645 (2016)
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Jacques Pécréaux, Stefanie Redemann, Zahraa Alayan, Benjamin Mercat, Sylvain Pastezeur, Carlos Garzon-Coral, Anthony Hyman, Jonathon Howard
The Mitotic Spindle in the One-Cell C. elegans Embryo Is Positioned with High Precision and Stability.
Biophys J, 111(8) 1773-1784 (2016)
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Oliver Wueseke, David Zwicker, Anne Schwager, Yao Liang Wong, Karen Oegema, Frank Jülicher, Anthony Hyman, Jeffrey Woodruff
Polo-like kinase phosphorylation determines Caenorhabditis elegans centrosome size and density by biasing SPD-5 toward an assembly-competent conformation.
Biol Open, 5(10) 1431-1440 (2016)
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S Kopprasch, Srirangan Dheban, Kai Schuhmann, Aimin Xu, K-M Schulte, Charmaine J Simeonovic, Peter E H Schwarz, Stefan Bornstein, Andrej Shevchenko, Juergen Graessler
Detection of Independent Associations of Plasma Lipidomic Parameters with Insulin Sensitivity Indices Using Data Mining Methodology.
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Guruchandar Arulmozhivarman, Martin Stöter, Marc Bickle, Martin Kräter, Manja Wobus, Gerhard Ehninger, Friedrich Stölzel, Michael Brand, Martin Bornhäuser, Nona Shayegi
In Vivo Chemical Screen in Zebrafish Embryos Identifies Regulators of Hematopoiesis Using a Semiautomated Imaging Assay.
J Biomol Screen, 21(9) 956-964 (2016)
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Felipe Mora-Bermúdez, Farhath Badsha, Sabina Kanton, J Gray Camp, Benjamin Vernot, Kathrin Köhler, Birger Voigt, Keisuke Okita, Tomislav Maricic, Zhisong He, Robert Lachmann, Svante Pääbo, Barbara Treutlein, Wieland B. Huttner
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German Tischler
Low Space External Memory Construction of the Succinct Permuted Longest Common Prefix Array
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Cell, 166(6) 1572-1584 (2016)
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Massimo Ganassi, Daniel Mateju, Ilaria Bigi, Laura Mediani, Ina Poser, Hyun-Ok Kate Lee, Samuel J Seguin, Federica F Morelli, Jonathan Vinet, Giuseppina Leo, Orietta Pansarasa, Cristina Cereda, Angelo Poletti, Simon Alberti, Serena Carra
A Surveillance Function of the HSPB8-BAG3-HSP70 Chaperone Complex Ensures Stress Granule Integrity and Dynamism.
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Felipe Mora-Bermúdez
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Biophys J, 111(3) 589-600 (2016)
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Xavier Prudent, Genis Parra, Peter Schwede, Juliana G. Roscito, Michael Hiller
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Mol Biol Evol, 33(8) 2135-2150 (2016)
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Elvan Boke, Martine Ruer, Martin Wühr, Margaret Coughlin, Regis P. Lemaitre, Steven Gygi, Simon Alberti, David N. Drechsel, Anthony Hyman, Timothy J. Mitchison
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Michael Heide, Marta Florio, Wieland B. Huttner
Die Rolle humanspezifischer Gene in der Gehirnentwicklung und -evolution
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Virag Sharma, Anas Elghafari, Michael Hiller
Coding exon-structure aware realigner (CESAR) utilizes genome alignments for accurate comparative gene annotation.
Nucleic Acids Res, 44(11) Art. No. e103 (2016)
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Hernán Morales-Navarrete, Hidenori Nonaka, Fabián Segovia-Miranda, Marino Zerial, Yannis Kalaidzidis
Automatic recognition and characterization of different non-parenchymal cells in liver tissue.
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Dan V Nicolau^✳︎, Mercy Lard, Till Korten, Falco C M J M van Delft, Malin Persson, Elina Bengtsson, Alf Månsson, Stefan Diez, Heiner Linke, Dan V Nicolau^✳︎
Reply to Einarsson: The computational power of parallel network exploration with many bioagents.
Proc Natl Acad Sci U.S.A., 113(23) Art. No. E3188 (2016)
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Michaela Wilsch-Bräuninger, Marta Florio, Wieland B. Huttner
Neocortex expansion in development and evolution - from cell biology to single genes.
Curr Opin Neurobiol, 39 122-132 (2016)
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Carlos Garzon-Coral, Horatiu Fantana, Jonathon Howard
A force-generating machinery maintains the spindle at the cell center during mitosis.
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Raphael Etournay, Matthias Merkel, Marko Popović, Holger Brandl, Natalie Dye, Benoit Aigouy, Guillaume Salbreux, Suzanne Eaton, Frank Jülicher
TissueMiner: a multiscale analysis toolkit to quantify how cellular processes create tissue dynamics.
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Marcus Braun, Zdenek Lansky, Feodor Hilitski, Zvonimir Dogic, Stefan Diez
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Cihan Erkut, Vamshidhar Gade, Sunil Laxman, Teymuras V. Kurzchalia
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Yoko Arai, Wieland B. Huttner, Federico Calegari
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Marta Florio, Takashi Namba, Katherine Long
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J Neurosci, 36(14) 3887-3889 (2016)
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Konstantin Thierbach, Gopi Shah, Ingmar Glauche, Jan Huisken, Ingo Roeder, Nico Scherf
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Christopher Schmied, Peter Steinbach, Tobias Pietzsch, Stephan Preibisch, Pavel Tomancak
An automated workflow for parallel processing of large multiview SPIM recordings.
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Arnab Saha, Masatoshi Nishikawa, Martin Behrndt, Carl-Philipp Heisenberg, Frank Jülicher, Stephan W. Grill
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Biophys J, 110(6) 1421-1429 (2016)
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Gheorghe Cojoc, Emanuele Roscioli, Lijuan Zhang, Alfonso García-Ulloa, Jagesh V Shah, Michael W Berns, Nenad Pavin, Daniela Cimini, Iva M Tolić, Juraj Gregan
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J Cell Biol, 212(7) 767-776 (2016)
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Ana Lisica, Christoph Engel, Marcus Jahnel, Édgar Roldán, Eric A. Galburt, Patrick Cramer, Stephan W. Grill
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Proc Natl Acad Sci U.S.A., 113(11) 2946-2951 (2016)
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Dan V Nicolau Jr, Mercy Lard, Till Korten, Falco C M J M van Delft, Malin Persson, Elina Bengtsson, Alf Månsson, Stefan Diez, Heiner Linke, Dan V Nicolau
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Proc Natl Acad Sci U.S.A., 113(10) 2591-2596 (2016)
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Ibrahim Ömer Çiçek, Samir Karaca, Marko Brankatschk, Suzanne Eaton, Henning Urlaub, Halyna R Shcherbata
Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet.
Genetics, 202(3) 1167-1183 (2016)
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Nereo Kalebic, Elena Taverna, Stefania Tavano, Fong Kuan Wong, Dana Suchold, Sylke Winkler, Wieland B. Huttner, Mihail Sarov
CRISPR/Cas9-induced disruption of gene expression in mouse embryonic brain and single neural stem cells in vivo.
EMBO Rep, 17(3) 338-348 (2016)
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Mihail Sarov^#, Christiane Barz, Helena Jambor, Marco Y Hein, Christopher Schmied, Dana Suchold, Bettina Stender, Stephan Janosch, Vinay Vikas Kj, R T Krishnan, Aishwarya Krishnamoorthy, Irene R S Ferreira, Radoslaw K Ejsmont, Katja Finkl, Susanne Hasse, Philipp Kämpfer, Nicole Plewka, Elisabeth Vinis, Siegfried Schloissnig, Elisabeth Knust, Volker Hartenstein, Matthias Mann, Mani Ramaswami, K VijayRaghavan, Pavel Tomancak^#, Frank Schnorrer^#
A genome-wide resource for the analysis of protein localisation in Drosophila.
Elife, 5 Art. No. e12068 (2016)
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Miguel Turrero García, Yoon Jeung Chang, Yoko Arai, Wieland B. Huttner
S-phase duration is the main target of cell cycle regulation in neural progenitors of developing ferret neocortex.
J Comp Neurol, 524(3) 456-470 (2016)
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Sophie Ayciriex, Hermeto Gerber, Guillermo M Garcia Osuna, Mohamed Chami, Henning Stahlberg, Andrej Shevchenko, Patrick C Fraering
The lipidome associated with the γ-secretase complex is required for its integrity and activity.
Biochem J, 473(3) 321-334 (2016)
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L Carine Stapel, Benoit Lombardot, Coleman Broaddus, Dagmar Kainmueller, Florian Jug, Eugene W Myers, Nadine Vastenhouw
Automated detection and quantification of single RNAs at cellular resolution in zebrafish embryos.
Development, 143(3) 540-546 (2016)
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Michael Kuhn, Ivica Letunic, Lars Juhl Jensen, Peer Bork
The SIDER database of drugs and side effects.
Nucleic Acids Res, 44(D1) 1075-1079 (2016)
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Damian Szklarczyk, Alberto Santos, Christian von Mering, Lars Juhl Jensen, Peer Bork, Michael Kuhn
STITCH 5: augmenting protein-chemical interaction networks with tissue and affinity data.
Nucleic Acids Res, 44(D1) 380-384 (2016)
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Holger Brandl^✳︎, HongKee Moon^✳︎, Miquel Vila-Farré, Shang-Yun Liu, Ian Henry^#, Jochen Rink^#
PlanMine - a mineable resource of planarian biology and biodiversity.
Nucleic Acids Res, 44 Art. No. D764–D773 (2016)
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Jaime Huerta-Cepas, Damian Szklarczyk, Kristoffer Forslund, Helen Cook, Davide Heller, Mathias C Walter, Thomas Rattei, Daniel R Mende, Shinichi Sunagawa, Michael Kuhn, Lars Juhl Jensen, Christian von Mering, Peer Bork
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences.
Nucleic Acids Res, 44(D1) 286-293 (2016)
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Nicole Bieberstein, Eva Kozáková, Martina Huranová, Prasoon K Thakur, Zuzana Krchňáková, Michaela Krausová, Fernando Carrillo Oesterreich, David Staněk
TALE-directed local modulation of H3K9 methylation shapes exon recognition.
Sci Rep, 6 Art. No. 29961 (2016)
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Helena Jambor, Pavel Mejstrik, Pavel Tomancak
Rapid Ovary Mass-Isolation (ROMi) to Obtain Large Quantities of Drosophila Egg Chambers for Fluorescent In Situ Hybridization.
Methods Mol Biol, 1478 253-262 (2016)
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Gheorghe Cojoc, Ana-Maria Florescu, Alexander Krull, Anna Klemm, Nenad Pavin, Frank Jülicher, Iva M Tolić
Paired arrangement of kinetochores together with microtubule pivoting and dynamics drive kinetochore capture in meiosis I.
Sci Rep, 6 Art. No. 25736 (2016)
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Yadira Boada, José Luis Pitarch, Alejandro Vignoni, Gilberto Reynoso-Meza, Jesús Picó
Optimization Alternatives for Robust Model-based Design of Synthetic Biological Circuits
IFAC-PapersOnLine, 49(7) 821-826 (2016)
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Elena Taverna, Felipe Mora-Bermúdez, Paulina J. Strzyz, Marta Florio, Jaroslav Icha, Christiane Haffner, Caren Norden, Michaela Wilsch-Bräuninger, Wieland B. Huttner
Non-canonical features of the Golgi apparatus in bipolar epithelial neural stem cells.
Sci Rep, 6 Art. No. 21206 (2016)
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Mykola Mylenko, Sebastian Boland, Sider Penkov, Julio Sampaio, Benoit Lombardot, Daniela Vorkel, Jean-Marc Verbavatz, Teymuras V. Kurzchalia
NAD+ Is a Food Component That Promotes Exit from Dauer Diapause in Caenorhabditis elegans.
PLoS ONE, 11(12) Art. No. e0167208 (2016)
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Till Korten, Samata Chaudhuri, Elena Tavkin, Marcus Braun, Stefan Diez
Kinesin-1 Expressed in Insect Cells Improves Microtubule in Vitro Gliding Performance, Long-Term Stability and Guiding Efficiency in Nanostructures.
IEEE Trans Nanobioscience, 15(1) 62-69 (2016)
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Susanne Sales, Juergen Graessler, Sara Ciucci, Rania Al-Atrib, Terhi Vihervaara, Kai Schuhmann, Dimple Kauhanen, Marko Sysi-Aho, Stefan Bornstein, Marc Bickle, Carlo Vittorio Cannistraci, Kim Ekroos, Andrej Shevchenko
Gender, Contraceptives and Individual Metabolic Predisposition Shape a Healthy Plasma Lipidome.
Sci Rep, 6 Art. No. 27710 (2016)
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Wiebke Jahr, Benjamin Schmid, Michael Weber, Jan Huisken
eduSPIM: Light Sheet Microscopy in the Museum.
PLoS ONE, 11(8) Art. No. e0161402 (2016)
DOI

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Jon M Carthy, Martin Stöter, Claudia Bellomo, Michael Vanlandewijck, Angelos Heldin, Anita Morén, Dimitris Kardassis, Timothy C Gahman, Andrew K Shiau, Marc Bickle, Marino Zerial, Carl-Henrik Heldin, Aristidis Moustakas
Chemical regulators of epithelial plasticity reveal a nuclear receptor pathway controlling myofibroblast differentiation.
Sci Rep, 6 Art. No. 29868 (2016)
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Linda Cerofolini, Sabrina Amar, Janelle Lauer, Tommaso Martelli, Marco Fragai, Claudio Luchinat, Gregg B Fields
Bilayer Membrane Modulation of Membrane Type 1 Matrix Metalloproteinase (MT1-MMP) Structure and Proteolytic Activity.
Sci Rep, 6 Art. No. 29511 (2016)
PDF DOI

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Xun Xiao, Veikko Geyer, Hugo Bowne-Anderson, Jonathon Howard, Ivo F. Sbalzarini
Automatic optimal filament segmentation with sub-pixel accuracy using generalized linear models and B-spline level-sets
Med Image Anal, 32 157-172 (2016)
PDF DOI

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Matthias Munder, Daniel Midtvedt, Titus Franzmann, Elisabeth Nüske, Oliver Otto, Maik Herbig, Elke Ulbricht, Paul Müller, Anna Taubenberger, Shovamayee Maharana, Liliana Malinovska, Doris Richter, Jochen Guck, Vasily Zaburdaev, Simon Alberti
A pH-driven transition of the cytoplasm from a fluid- to a solid-like state promotes entry into dormancy.
Elife, 5 Art. No. e09347 (2016)
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Mark Leaver, Simone Kienle, Maria L Begasse, Ralf J Sommer, Anthony Hyman
A locus in Pristionchus pacificus that is responsible for the ability to give rise to fertile offspring at higher temperatures.
Biol Open, 5(8) 1111-1117 (2016)
PDF DOI

2015

Michael Weber, Jan Huisken
In vivo imaging of cardiac development and function in zebrafish using light sheet microscopy.
Swiss Med Wkly, 145 Art. No. w14227 (2015)
DOI

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J Gray Camp, Farhath Badsha, Marta Florio, Sabina Kanton, Tobias Gerber, Michaela Wilsch-Bräuninger, Eric Lewitus, Alex Sykes, Wulf Hevers, Madeline Lancaster, Jürgen A. Knoblich, Robert Lachmann, Svante Pääbo, Wieland B. Huttner, Barbara Treutlein
Human cerebral organoids recapitulate gene expression programs of fetal neocortex development.
Proc Natl Acad Sci U.S.A., 112(51) 15672-15677 (2015)
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Hernán Morales-Navarrete, Fabián Segovia-Miranda, Piotr Klukowski, Kirstin Meyer, Hidenori Nonaka, Giovanni Marsico, Mikhail Chernykh, Alexander Kalaidzidis, Marino Zerial^#, Yannis Kalaidzidis^#
A versatile pipeline for the multi-scale digital reconstruction and quantitative analysis of 3D tissue architecture.
Elife, 4 Art. No. e11214 (2015)
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Sarita Hebbar, Ishtapran Sahoo, Artur Matysik, Irene Argudo Garcia, Kathleen Amy Osborne, Cyrus Papan, Federico Torta, Pradeep Narayanaswamy, Xiu Hui Fun, Markus R Wenk, Andrej Shevchenko, Dominik Schwudke, Rachel Kraut
Ceramides And Stress Signalling Intersect With Autophagic Defects In Neurodegenerative Drosophila blue cheese (bchs) Mutants.
Sci Rep, 5 Art. No. 15926 (2015)
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Kathrin Reichwald, Andreas Petzold, Philipp Koch, Bryan R Downie, Nils Hartmann, Stefan Pietsch, Mario Baumgart, Domitille Chalopin, Marius Felder, Martin Bens, Arne Sahm, Karol Szafranski, Stefan Taudien, Marco Groth, Ivan Arisi, Anja Weise, Samarth S Bhatt, Virag Sharma, Johann M Kraus, Florian Schmid, Steffen Priebe, Thomas Liehr, Matthias Görlach, Manuel E Than, Michael Hiller, Hans A Kestler, Jean-Nicolas Volff, Manfred Schartl, Alessandro Cellerino, Christoph Englert, Matthias Platzer
Insights into Sex Chromosome Evolution and Aging from the Genome of a Short-Lived Fish.
Cell, 163(6) 1527-1538 (2015)
PDF DOI

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Felipe Mora-Bermúdez, Wieland B. Huttner
Novel insights into mammalian embryonic neural stem cell division: focus on microtubules.
Mol Biol Cell, 26(24) 4302-4306 (2015)
DOI

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David Richmond, Dagmar Kainmueller, Ben Glocker, Carsten Rother, Gene Myers
Uncertainty-Driven Forest Predictors for Vertebra Localization and Segmentation
In: Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2015 : 18th International Conference, Munich, Germany, October 5-9, 2015, Proceedings, Part I (2015) Lecture Notes in Computer Science ; 9349, Cham, Springer International Publishing (2015), 653-660
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Anneke Hibbel, Aliona Bogdanova, Mohammed Mahamdeh, Anita Jannasch, Marko Storch, Erik Schäffer, Dimitris Liakopoulos, Jonathon Howard
Kinesin Kip2 enhances microtubule growth in vitro through length-dependent feedback on polymerization and catastrophe.
Elife, 4 Art. No. e10542 (2015)
PDF DOI

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Alexander Mietke, Oliver Otto, Salvatore Girardo, Philipp Rosendahl, Anna Taubenberger, Stefan Golfier, Elke Ulbricht, Sebastian Aland, Jochen Guck, Elisabeth Fischer-Friedrich
Extracting Cell Stiffness from Real-Time Deformability Cytometry: Theory and Experiment.
Biophys J, 109(10) 2023-2036 (2015)
PDF DOI

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David Flores-Benitez, Elisabeth Knust
Crumbs is an essential regulator of cytoskeletal dynamics and cell-cell adhesion during dorsal closure in Drosophila.
Elife, 4 Art. No. e07398 (2015)
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Oksana Lavrynenko, Jonathan Rodenfels, Maria Carvalho, Natalie Dye, Rene Lafont, Suzanne Eaton, Andrej Shevchenko
The ecdysteroidome of Drosophila: influence of diet and development.
Development, 142(21) 3758-3768 (2015)
DOI

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Dimitrios Papadopoulos, Aleksandar J Krmpot, Stanko N Nikolić, Robert Krautz, Lars Terenius, Pavel Tomancak, Rudolf Rigler, Walter J Gehring, Vladana Vukojević
Probing the kinetic landscape of Hox transcription factor-DNA binding in live cells by massively parallel Fluorescence Correlation Spectroscopy.
Mech Dev, 138(2) 218-225 (2015)
PDF DOI

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Benjamin Schmid, Jan Huisken
Real-time multi-view deconvolution.
Bioinformatics, 31(20) 3398-3400 (2015)
DOI

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Inna Kalaidzidis, Marta Miaczynska, Marta Brewińska-Olchowik, Anna Hupalowska, Charles Ferguson, Robert G. Parton, Yannis Kalaidzidis, Marino Zerial
APPL endosomes are not obligatory endocytic intermediates but act as stable cargo-sorting compartments.
J Cell Biol, 211(1) 123-144 (2015)
DOI

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Edo Dzafic, Paulina J. Strzyz, Michaela Wilsch-Bräuninger, Caren Norden
Centriole Amplification in Zebrafish Affects Proliferation and Survival but Not Differentiation of Neural Progenitor Cells.
Cell Rep, 13(1) 168-182 (2015)
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James Sáenz, Daniel Grosser, Alexander S Bradley, Thibaut Lagny, Oksana Lavrynenko, Martyna Broda, Kai Simons
Hopanoids as functional analogues of cholesterol in bacterial membranes.
Proc Natl Acad Sci U.S.A., 112(38) 11971-11976 (2015)
DOI

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Jerome Gilleron, Prasath Paramasivam, Anja Zeigerer, William Querbes, Giovanni Marsico, Cordula Andree, Sarah Seifert, Pablo Amaya, Martin Stöter, Victor Koteliansky, Herbert Waldmann, Kevin Fitzgerald, Yannis Kalaidzidis, Akin Akinc, Martin A Maier, Muthiah Manoharan, Marc Bickle, Marino Zerial
Identification of siRNA delivery enhancers by a chemical library screen.
Nucleic Acids Res, 43(16) 7984-8001 (2015)
PDF DOI

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Liliana Malinovska, Simon Alberti
Protein misfolding in Dictyostelium: Using a freak of nature to gain insight into a universal problem.
Prion, 9(5) 339-346 (2015)
DOI

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Wiebke Jahr, Benjamin Schmid, Christopher Schmied, Florian Fahrbach, Jan Huisken
Hyperspectral light sheet microscopy.
Nat Commun, 6 Art. No. 7990 (2015)
DOI

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Jan Böttger, Katrin Arnold, Carlo Thiel, Christiane Rennert, Susanne Aleithe, Ute Hofmann, Sebastian Vlaic, Susanne Sales, Andrej Shevchenko, Madlen Matz-Soja
RNAi in murine hepatocytes: the agony of choice-a study of the influence of lipid-based transfection reagents on hepatocyte metabolism.
Arch Toxicol, 89(9) 1579-1588 (2015)
DOI

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Avinash Patel, Hyun-Ok Kate Lee, Louise Jawerth, Shovamayee Maharana, Marcus Jahnel, Marco Y Hein, Stoyno Stoynov, Julia Mahamid, Shambaditya Saha, Titus Franzmann, Andrei Pozniakovski, Ina Poser, Nicola Maghelli, Loic Royer, Martin Weigert, Eugene W Myers, Stephan W. Grill, David N. Drechsel, Anthony Hyman, Simon Alberti
A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation.
Cell, 162(5) 1066-1077 (2015)
DOI

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Li Ding, Maciej Paszkowski-Rogacz, Maria Winzi, Debojyoti Chakraborty, Mirko Theis, Sukhdeep Singh, Giovanni Ciotta, Ina Poser, Assen Roguev, Wai Kit Chu, Chunaram Choudhary, Matthias Mann, A. Francis Stewart, Nevan J Krogan, Frank Buchholz
Systems Analyses Reveal Shared and Diverse Attributes of Oct4 Regulation in Pluripotent Cells.
Cell Sys, 1(2) 141-151 (2015)

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Nico Scherf, Jan Huisken
The smart and gentle microscope.
Nat Biotechnol, 33(8) 815-818 (2015)
DOI

---
Cihan Erkut, Teymuras V. Kurzchalia
The C. elegans dauer larva as a paradigm to study metabolic suppression and desiccation tolerance.
Planta, 242(2) 389-396 (2015)
DOI

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Fong Kuan Wong, Jifeng Fei, Felipe Mora-Bermúdez, Elena Taverna, Christiane Haffner, Jun Fu, Konstantinos Anastassiadis, A Francis Stewart, Wieland B. Huttner
Sustained Pax6 Expression Generates Primate-like Basal Radial Glia in Developing Mouse Neocortex.
PLoS Biol, 13(8) Art. No. e1002217 (2015)
PDF DOI

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Mareike Albert, Wieland B. Huttner
Clever space saving-how the cerebral cortex folds.
EMBO J, 34(14) 1845-1847 (2015)
DOI

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Mesut Bilgin, Laura Bindila, Juergen Graessler, Andrej Shevchenko
Quantitative profiling of endocannabinoids in lipoproteins by LC-MS/MS.
Anal Bioanal Chem, 407(17) 5125-5131 (2015)
DOI

---
David Flores-Benitez, Elisabeth Knust
Ménage a Trois to Form the Tricellular Junction.
Dev Cell, 33(5) 501-503 (2015)
DOI

---
Alexandra Kumichel, Katja Kapp, Elisabeth Knust
A Conserved Di-Basic Motif of Drosophila Crumbs Contributes to Efficient ER Export.
Traffic, 16(6) 604-616 (2015)
DOI

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Loic Royer, Martin Weigert, Ulrik Günther, Nicola Maghelli, Florian Jug, Ivo F. Sbalzarini, Eugene W Myers
ClearVolume: open-source live 3D visualization for light-sheet microscopy.
Nat Methods, 12(6) 480-481 (2015)
PDF DOI

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Tobias Pietzsch^#, Stephan Saalfeld, Stephan Preibisch, Pavel Tomancak^#
BigDataViewer: visualization and processing for large image data sets.
Nat Methods, 12(6) 481-483 (2015)
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Carlas S Smith, Stephan Preibisch, Aviva Joseph, Sara Abrahamsson, Bernd Rieger, Eugene Myers, Robert H. Singer, David Grunwald
Nuclear accessibility of β-actin mRNA is measured by 3D single-molecule real-time tracking.
J Cell Biol, 209(4) 609-619 (2015)
DOI

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Liliana Malinovska, Sandra Palm, Kimberley Gibson, Jean-Marc Verbavatz, Simon Alberti
Dictyostelium discoideum has a highly Q/N-rich proteome and shows an unusual resilience to protein aggregation.
Proc Natl Acad Sci U.S.A., 112(20) 2620-2629 (2015)
DOI

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Jeffrey Woodruff, Oliver Wueseke, Valeria Viscardi, Julia Mahamid, Stacy D Ochoa, Jakob Bunkenborg, Per Widlund, Andrei I. Pozniakovsky, Esther Zanin, Shirin Bahmanyar, Andrea Zinke, Sun Hae Hong, Markus Decker, Wolfgang Baumeister, Jens S Andersen, Karen Oegema, Anthony Hyman
Centrosomes. Regulated assembly of a supramolecular centrosome scaffold in vitro.
Science, 348(6236) 808-812 (2015)
DOI

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Anja Zeigerer, Roman L Bogorad, Kirti Sharma, Jerome Gilleron, Sarah Seifert, Susanne Sales, Nikolaus Berndt, Sascha Bulik, Giovanni Marsico, Rochelle C J D'Souza, Naharajan Lakshmanaperumal, Kesavan Meganathan, Karthick Natarajan, Agapios Sachinidis, Andreas Dahl, Hermann-Georg Holzhütter, Andrej Shevchenko, Matthias Mann, Victor Koteliansky, Marino Zerial
Regulation of Liver Metabolism by the Endosomal GTPase Rab5.
Cell Rep, 11(6) 884-892 (2015)
DOI

---
Sebastian Dunst, Tom Kazimiers, Felix von Zadow, Helena Jambor, Andreas Sagner, Beate Brankatschk, Ali Mahmoud, Stephanie Spannl, Pavel Tomancak^#, Suzanne Eaton^#, Marko Brankatschk^#
Endogenously Tagged Rab Proteins: A Resource to Study Membrane Trafficking in Drosophila.
Dev Cell, 33(3) 351-365 (2015)
DOI

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Marisa P. McShane, Tim Friedrichson, Angelika Giner, Felix Meyenhofer, Rico Barsacchi, Marc Bickle, Marino Zerial
A Combination of Screening and Computational Approaches for the Identification of Novel Compounds That Decrease Mast Cell Degranulation.
J Biomol Screen, 20(6) 720-728 (2015)
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Florian Jug, Tobias Pietzsch, Dagmar Kainmueller, Gene Myers
Tracking by Assignment Facilitates Data Curation
In: Medical Image Computing and Computer-Assisted Intervention – MICCAI 2014 (2015) IMIC Interactive Medical Image Computing Workshop, Amsterdam, Netherlands, Academic Press (2015), 1-12
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Marta Florio, Mareike Albert, Elena Taverna, Takashi Namba, Holger Brandl, Eric Lewitus, Christiane Haffner, Alex Sykes, Fong Kuan Wong, Jula Peters, E. Guhr, Sylvia Klemroth, Kay Prüfer, Janet Kelso, Ronald Naumann, Ina Nüsslein, Andreas Dahl, Robert Lachmann, Svante Pääbo, Wieland B. Huttner
Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion.
Science, 347(6229) 1465-1470 (2015)
DOI

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Helena Khaliullina, Mesut Bilgin, Julio Sampaio, Andrej Shevchenko, Suzanne Eaton
Endocannabinoids are conserved inhibitors of the Hedgehog pathway.
Proc Natl Acad Sci U.S.A., 112(11) 3415-3420 (2015)
DOI

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Marc Gentzel, Carolin Schille, Verena Rauschenberger, Alexandra Schambony
Distinct functionality of dishevelled isoforms on Ca2+/calmodulin-dependent protein kinase 2 (CamKII) in Xenopus gastrulation.
Mol Biol Cell, 26(5) 966-977 (2015)
DOI

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Michael Habeck, Haim Haviv, Adriana Katz, Einat Kapri-Pardes, Sophie Ayciriex, Andrej Shevchenko, Haruo Ogawa, Chikashi Toyoshima, Steven J D Karlish
Stimulation, Inhibition, or Stabilization of Na,K-ATPase Caused by Specific Lipid Interactions at Distinct Sites.
J Biol Chem, 290(8) 4829-4842 (2015)
DOI

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Maria L Begasse, Mark Leaver, Federico Vazquez, Stephan W. Grill, Anthony Hyman
Temperature Dependence of Cell Division Timing Accounts for a Shift in the Thermal Limits of C. elegans and C. briggsae.
Cell Rep, 10(5) 647-653 (2015)
DOI

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Roberto Villaseñor, Hidenori Nonaka, Perla Del Conte-Zerial, Yannis Kalaidzidis, Marino Zerial
Regulation of EGFR signal transduction by analogue-to-digital conversion in endosomes.
Elife, 4 Art. No. e06156 (2015)
PDF DOI

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Marta Maria Swierczynska, Ivona Mateska, M Peitzsch, Stefan Bornstein, Trian Chavakis, G Eisenhofer, Valéria Lamounier-Zepter, Suzanne Eaton
Changes in morphology and function of adrenal cortex in mice fed a high-fat diet.
Int J Obes (Lond), 39(2) 321-330 (2015)
DOI

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Helena Jambor^#, Vineeth Surendranath, Alex T. Kalinka, Pavel Mejstrik, Stephan Saalfeld, Pavel Tomancak^#
Systematic imaging reveals features and changing localization of mRNAs in Drosophila development.
Elife, 4 Art. No. e05003 (2015)
DOI

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Damian Szklarczyk, Andrea Franceschini, Stefan Wyder, Kristoffer Forslund, Davide Heller, Jaime Huerta-Cepas, Milan Simonovic, Alexander Roth, Alberto Santos, Kalliopi P Tsafou, Michael Kuhn, Peer Bork, Lars Juhl Jensen, Christian von Mering
STRING v10: protein-protein interaction networks, integrated over the tree of life.
Nucleic Acids Res, 43(D1) 447-452 (2015)
DOI

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Sonja Kroschwald, Shovamayee Maharana, Daniel Mateju, Liliana Malinovska, Elisabeth Nüske, Ina Poser, Doris Richter, Simon Alberti
Promiscuous interactions and protein disaggregases determine the material state of stress-inducible RNP granules.
Elife, 4 Art. No. e06807 (2015)
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Eric Lewitus, Wieland B. Huttner
Neurodevelopmental LincRNA Microsyteny Conservation and Mammalian Brain Size Evolution.
PLoS ONE, 10(7) Art. No. e0131818 (2015)
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Amulya Priya, Inna Kalaidzidis, Yannis Kalaidzidis, David Lambright, Sunando Datta
Molecular insights into rab7-mediated endosomal recruitment of core retromer: deciphering the role of vps26 and vps35.
Traffic, 16(1) 68-84 (2015)
DOI

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Jeffrey Woodruff, Anthony Hyman
Method: In vitro analysis of pericentriolar material assembly.
Methods Cell Biol, 129 369-382 (2015)
DOI

---
Yoko Arai, Julio Sampaio, Michaela Wilsch-Bräuninger, Andreas Ettinger, Christiane Haffner, Wieland B. Huttner
Lipidome of midbody released from neural stem and progenitor cells during mammalian cortical neurogenesis.
Front Cell Neurosci, 9 Art. No. 325 (2015)
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Raphael Etournay, Marko Popović, Matthias Merkel, Amitabha Nandi, Corinna Blasse, Benoit Aigouy, Holger Brandl, Gene Myers, Guillaume Salbreux, Frank Jülicher, Suzanne Eaton
Interplay of cell dynamics and epithelial tension during morphogenesis of the Drosophila pupal wing.
Elife, 4 Art. No. e07090 (2015)
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Sider Penkov, Damla Kaptan, Cihan Erkut, Mihail Sarov, Fanny Mende, Teymuras V. Kurzchalia
Integration of carbohydrate metabolism and redox state controls dauer larva formation in Caenorhabditis elegans.
Nat Commun, 6 Art. No. 8060 (2015)
DOI

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Simone Reber, Anthony A. Hyman
Emergent Properties of the Metaphase Spindle
In: Mitosis : a subject collection form Cold Spring Harbor Perspectives in biology. (Eds.) Mitsuhiro Yanagida, Anthony A. Hyman, Jonathon Pines,Cold Spring Harbor, N.Y,Cold Spring Harbor Laboratory Press (2015),31-52

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Judith Paridaen, Wieland B. Huttner, Michaela Wilsch-Bräuninger
Analysis of primary cilia in the developing mouse brain.
Methods Cell Biol, 127 93-129 (2015)
DOI

2014

Joshua Alper, Franziska Decker, Bernice Agana, Jonathon Howard
The Motility of Axonemal Dynein Is Regulated by the Tubulin Code
Biophys J, 107(12) 2872-2880 (2014)

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Xin Liang, Johnson Madrid, Jonathon Howard
The microtubule-based cytoskeleton is a component of a mechanical signaling pathway in fly campaniform receptors.
Biophys J, 107(12) 2767-2774 (2014)
DOI

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Andrea Meinhardt, Dominic Eberle, Akira Tazaki, Adrian Ranga, Marco Niesche, Michaela Wilsch-Bräuninger, Agnieszka Stec, Gabriele Schackert, Matthias Lutolf, Elly M. Tanaka
3D Reconstitution of the Patterned Neural Tube from Embryonic Stem Cells.
Stem Cell Reports, 3(6) 987-999 (2014)
DOI

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Martin Machyna, Stephanie Kehr, Korinna Straube, Dennis Kappei, Frank Buchholz, Falk Butter, Jernej Ule, Jana Hertel, Peter F Stadler, Karla M. Neugebauer
The Coilin Interactome Identifies Hundreds of Small Noncoding RNAs that Traffic through Cajal Bodies
Mol Cell, 56(3) 389-399 (2014)

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Sawsan E Abusharkh, Cihan Erkut, Jana Oertel, Teymuras V. Kurzchalia, Karim Fahmy
The Role of Phospholipid Headgroup Composition and Trehalose in the Desiccation Tolerance of Caenorhabditis elegans.
Langmuir, 30(43) 12897-12906 (2014)
DOI

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Florian Jug, Tobias Pietzsch, Dagmar Kainmueller, Jan Funke, Matthias Kaiser, Erik van Nimwegen, Carsten Rother, Gene Myers
Optimal Joint Segmentation and Tracking of Escherichia Coli in the Mother Machine
In: Bayesian and grAphical models for biomedical imaging first international workshop, BAMBI 2014, Cambridge, MA, USA, September 18, 2014 ; revised selected papers (2014) Lecture Notes in Computer Science ; 8677, New York, Springer (2014), 25-36
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Fabian Rost, Christina Eugster, Christian Schröter, Andrew C. Oates, Lutz Brusch
Chevron formation of the zebrafish muscle segments.
J Exp Biol, 217(21) 3870-3882 (2014)
DOI

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Dagmar Kainmueller, Florian Jug, Carsten Rother, Eugene W Myers
Active Graph Matching for Automatic Joint Segmentation and Annotation of C. elegans
In: Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014 : 17th International Conference, Boston, MA, USA, September 14-18, 2014, Proceedings, Part I (2014) Lecture Notes in Computer Science ; 8673 , New York, Springer (2014), 81-88
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Bi-Chang Chen, Wesley R Legant, Kai Wang, Lin Shao, Daniel E Milkie, Michael W Davidson, Chris Janetopoulos, Xufeng S Wu, John A Hammer, Zhe Liu, Brian P English, Yuko Mimori-Kiyosue, Daniel P Romero, Alex T Ritter, Jennifer Lippincott-Schwartz, Lillian Fritz-Laylin, R Dyche Mullins, Diana M Mitchell, Joshua N Bembenek, Anne-Cecile Reymann, Ralph Böhme, Stephan W. Grill, Jennifer T Wang, Geraldine Seydoux, U Serdar Tulu, Daniel P Kiehart, Eric Betzig
Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution.
Science, 346(6208) Art. No. 1257998 (2014)
DOI

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Marnix Wieffer, Marisa P. McShane, Marino Zerial
Rab Proteins and the Organization of Organelle Membrane Domains.
In: Ras Superfamily Small G Proteins: Biology and Mechanisms : 2. (Eds.) Alfred Wittinghofer,Cham,Springer International Publishing (2014),17-38 Ch. 2
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Elena Taverna, Magdalena Götz, Wieland B. Huttner
The cell biology of neurogenesis: toward an understanding of the development and evolution of the neocortex.
Annu Rev Cell Dev Biol, 30 465-502 (2014)
DOI

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Oliver Wueseke, Jakob Bunkenborg, Marco Y Hein, Andrea Zinke, Valeria Viscardi, Jeffrey Woodruff, Karen Oegema, Matthias Mann, Jens S Andersen, Anthony Hyman
The Caenorhabditis elegans pericentriolar material components SPD-2 and SPD-5 are monomeric in the cytoplasm before incorporation into the PCM matrix.
Mol Biol Cell, 25(19) 2984-2992 (2014)
DOI

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Christoph Klingner, Anoop V Cherian, Johannes Fels, Philipp M Diesinger, Roland Aufschnaiter, Nicola Maghelli, Thomas Keil, Gisela Beck, Iva M. Tolic-Norrelykke, Mark Bathe, Roland Wedlich-Soldner
Isotropic actomyosin dynamics promote organization of the apical cell cortex in epithelial cells.
J Cell Biol, 207(1) 107-121 (2014)
PDF DOI

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Marco Nousch, Assa Yeroslaviz, Bianca Habermann, Christian R. Eckmann
The cytoplasmic poly(A) polymerases GLD-2 and GLD-4 promote general gene expression via distinct mechanisms.
Nucleic Acids Res, 42(18) 11622-11633 (2014)
PDF DOI

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Jeffrey Woodruff, Oliver Wueseke, Anthony Hyman
Pericentriolar material structure and dynamics.
Philos Trans R Soc Lond B Biol Sci, 369(1650) Art. No. 20130459 (2014)
DOI

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Enrico Perini, Ramona Schaefer, Martin Stöter, Yannis Kalaidzidis, Marino Zerial
Mammalian CORVET Is Required for Fusion and Conversion of Distinct Early Endosome Subpopulations.
Traffic, 15(12) 1366-1389 (2014)
DOI

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Sophia Millonigg, Ryuji Minasaki, Marco Nousch, Christian R. Eckmann
GLD-4-Mediated Translational Activation Regulates the Size of the Proliferative Germ Cell Pool in the Adult C. elegans Germ Line.
PLoS Genet, 10(9) Art. No. e1004647 (2014)
DOI

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Michaela Mickoleit, Benjamin Schmid, Michael Weber, Florian Fahrbach, Sonja Hombach, Sven Reischauer, Jan Huisken
High-resolution reconstruction of the beating zebrafish heart.
Nat Methods, 11(9) 919-922 (2014)
DOI

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Daniele Soroldoni^✳︎, David J. Jörg^✳︎, Luis G. Morelli, David Richmond, Johannes Schindelin, Frank Jülicher, Andrew C. Oates
A Doppler effect in embryonic pattern formation
Science, 345(6193) 222-225 (2014)
DOI

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Felipe Mora-Bermúdez, Fumio Matsuzaki, Wieland B. Huttner
Specific polar subpopulations of astral microtubules control spindle orientation and symmetric neural stem cell division.
Elife, 3 Art. No. e02875 (2014)
PDF DOI

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Yusuke Toyoda, Cihan Erkut, Francisco Pan-Montojo, Sebastian Boland, Martin P Stewart, Daniel J. Müller, Wolfgang Wurst, Anthony Hyman, Teymuras V. Kurzchalia
Products of the Parkinson's disease-related glyoxalase DJ-1, D-lactate and glycolate, support mitochondrial membrane potential and neuronal survival.
Biol Open, 3(8) 777-784 (2014)
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Sarita Hebbar, Wolf Dieter Schulz, Ulrich Sauer, Dominik Schwudke
Laser capture microdissection coupled with on-column extraction LC-MS(n) enables lipidomics of fluorescently labeled Drosophila neurons.
Anal Chem, 86(11) 5345-5352 (2014)
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Ramya Lakshminarayan, Christian Wunder, Ulrike Becken, Mark T Howes, Carola Benzing, Senthil Arumugam, Susanne Sales, Nicholas Ariotti, Valérie Chambon, Christophe Lamaze, Damarys Loew, Andrej Shevchenko, Katharina Gaus, Robert G. Parton, Ludger Johannes
Galectin-3 drives glycosphingolipid-dependent biogenesis of clathrin-independent carriers.
Nat Cell Biol, 16(6) 595-606 (2014)
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Laurence Ramsey, Viktor Schroeder, Harm van Zalinge, Michael Berndt, Till Korten, Stefan Diez, Dan V Nicolau
Control and gating of kinesin-microtubule motility on electrically heated thermo-chips.
Biomed Microdevices, 16(3) 459-463 (2014)
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Michael Kuhn, Anthony Hyman, Andreas Beyer
Coiled-coil proteins facilitated the functional expansion of the centrosome.
PLoS Comput Biol, 10(6) Art. No. e1003657 (2014)
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Fong Kuan Wong, Christiane Haffner, Wieland B. Huttner, Elena Taverna
Microinjection of membrane-impermeable molecules into single neural stem cells in brain tissue.
Nat Protoc, 9(5) 1170-1182 (2014)
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Judith Paridaen, Wieland B. Huttner
Neurogenesis during development of the vertebrate central nervous system.
EMBO Rep, 15(4) 351-364 (2014)
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Nagananda Gurudev, Michaela Yuan, Elisabeth Knust
chaoptin, prominin, eyes shut and crumbs form a genetic network controlling the apical compartment of Drosophila photoreceptor cells.
Biol Open, 3(5) 332-341 (2014)
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Florian Jug^✳︎, Tobias Pietzsch^✳︎, Stephan Preibisch, Pavel Tomancak
Bioimage Informatics in the context of Drosophila research.
Methods, 68(1) 60-73 (2014)
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Sider Penkov, Akira Ogawa, Ulrike Schmidt, Dhananjay Tate, Vyacheslav Zagoriy, Sebastian Boland, Margit Gruner, Daniela Vorkel, Jean-Marc Verbavatz, Ralf J Sommer, Hans-Joachim Knölker, Teymuras V. Kurzchalia
A wax ester promotes collective host finding in the nematode Pristionchus pacificus.
Nat Chem Biol, 10(4) 281-285 (2014)
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Minna-Liisa Ankö, Karla M. Neugebauer
Immunopurification of Endogenous RNAs Associated with RNA Binding Proteins In vivo
In: Handbook of RNA biochemistry. (Eds.) R. K. Hartmann, Albrecht Bindereif, A. Schön, E. Westhof,Weinheim,Wiley-VCH (2014),1-1 Ch. 45
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Cyrus Papan, Sider Penkov, Ronny Herzog, Christoph Thiele, Teymuras V. Kurzchalia, Andrej Shevchenko
Systematic screening for novel lipids by shotgun lipidomics.
Anal Chem, 86(5) 2703-2710 (2014)
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Helena Jambor, Sandra Mueller, Simon L Bullock, Anne Ephrussi
A stem-loop structure directs oskar mRNA to microtubule minus ends.
RNA, 20(4) 429-439 (2014)
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Katharina Seitz, Verena Dürsch, Jakub Harnoš, Vitezslav Bryja, Marc Gentzel, Alexandra Schambony
β-Arrestin interacts with the beta/gamma subunits of trimeric G-proteins and dishevelled in the Wnt/Ca(2+) pathway in xenopus gastrulation.
PLoS ONE, 9(1) Art. No. e87132 (2014)
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Stefanie Redemann, Britta Weber, Marit Möller, Jean-Marc Verbavatz, Anthony Hyman, Daniel Baum, Steffen Prohaska, Thomas Müller-Reichert
The segmentation of microtubules in electron tomograms using Amira.
Methods Mol Biol, 1136 261-278 (2014)
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Ruth Rincon-Heredia, David Flores-Benitez, Catalina Flores-Maldonado, José Bonilla-Delgado, Vicky García-Hernández, Odette Verdejo-Torres, Aida M Castillo, Isabel Larré, Augusto C Poot-Hernández, Martha Franco, Patricio Gariglio, José L Reyes, Rubén G Contreras
Ouabain induces endocytosis and degradation of tight junction proteins through ERK1/2-dependent pathways.
Exp Cell Res, 320(1) 108-118 (2014)
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Roman L Bogorad, Hao Yin, Anja Zeigerer, Hidenori Nonaka, Vera M Ruda, Marino Zerial, Daniel G Anderson^#, Victor Koteliansky^#
Nanoparticle-formulated siRNA targeting integrins inhibits hepatocellular carcinoma progression in mice.
Nat Commun, 5 Art. No. 3869 (2014)
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Alexis Webb, Daniele Soroldoni, Annelie Oswald, Johannes Schindelin, Andrew C. Oates
Generation of dispersed presomitic mesoderm cell cultures for imaging of the zebrafish segmentation clock in single cells.
J Vis Exp, (89) Art. No. e50307 (2014)
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Nicole Bieberstein, Korinna Straube, Karla M. Neugebauer
Chromatin immunoprecipitation approaches to determine co-transcriptional nature of splicing.
Methods Mol Biol, 1126 315-323 (2014)
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Daiki Umetsu, Sebastian Dunst, Christian Dahmann
An RNA interference screen for genes required to shape the anteroposterior compartment boundary in Drosophila identifies the eph receptor.
PLoS ONE, 9(12) Art. No. e114340 (2014)
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Sundar Naganathan, Sebastian Fürthauer, Masatoshi Nishikawa, Frank Jülicher, Stephan W. Grill
Active torque generation by the actomyosin cell cortex drives left-right symmetry breaking.
Elife, 3 Art. No. e04165 (2014)
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2013

Cihan Erkut, Andrej Vasilj, Sebastian Boland, Bianca Habermann, Andrej Shevchenko, Teymuras V. Kurzchalia
Molecular Strategies of the Caenorhabditis elegans Dauer Larva to Survive Extreme Desiccation.
PLoS ONE, 8(12) Art. No. e82473 (2013)
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Mike Bonny, Elisabeth Fischer-Friedrich, Martin Loose, Petra Schwille, Karsten Kruse
Membrane binding of MinE allows for a comprehensive description of Min-protein pattern formation.
PLoS Comput Biol, 9(12) Art. No. e1003347 (2013)
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Aniket Ghosh, Tina Kling, Nicolas Snaidero, Julio Sampaio, Andrej Shevchenko, Heribert Gras, Bart Geurten, Martin Göpfert, Jörg B Schulz, Aaron Voigt, Mikael Simons
A Global In Vivo Drosophila RNAi Screen Identifies a Key Role of Ceramide Phosphoethanolamine for Glial Ensheathment of Axons.
PLoS Genet, 9(12) Art. No. e1003980 (2013)
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Judith Paridaen, Michaela Wilsch-Bräuninger, Wieland B. Huttner
Asymmetric inheritance of centrosome-associated primary cilium membrane directs ciliogenesis after cell division.
Cell, 155(2) 333-344 (2013)
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Simone Reber, Johannes Baumgart, Per Widlund, Andrei I. Pozniakovsky, Jonathon Howard, Anthony Hyman, Frank Jülicher
XMAP215 activity sets spindle length by controlling the total mass of spindle microtubules
Nat Cell Biol, 15(9) 1116-1122 (2013)
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Sameer Agarwal, Cornelia Schroeder, Georg Schlechtingen, Tobias Braxmeier, Gary Jennings, Hans-Joachim Knölker
Evaluation of steroidal amines as lipid raft modulators and potential anti-influenza agents.
Bioorg Med Chem Lett, 23(18) 5165-5169 (2013)
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Esther Zanin, Arshad Desai, Ina Poser, Yusuke Toyoda, Cordula Andree, Claudia Moebius, Marc Bickle, Barbara Conradt, Alisa Piekny, Karen Oegema
A conserved RhoGAP limits M phase contractility and coordinates with microtubule asters to confine RhoA during cytokinesis.
Dev Cell, 26(5) 496-510 (2013)
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Ivana Viktorinová, Christian Dahmann
Microtubule Polarity Predicts Direction of Egg Chamber Rotation in Drosophila.
Curr Biol, 23(15) 1472-1477 (2013)
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Viktor Schroeder^✳︎, Till Korten^✳︎, Heiner Linke, Stefan Diez^#, Ivan Maximov^#
Dynamic Guiding of Motor-Driven Microtubules on Electrically Heated, Smart Polymer Tracks.
Nano Lett, 13(7) 3434-3438 (2013)
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Sandra Soukup, Shirin Pocha, Michaela Yuan, Elisabeth Knust
DLin-7 Is Required in Postsynaptic Lamina Neurons to Prevent Light-Induced Photoreceptor Degeneration in Drosophila.
Curr Biol, 23(14) 1349-1354 (2013)
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Marija Zanic, Per Widlund, Anthony Hyman, Jonathon Howard
Synergy between XMAP215 and EB1 increases microtubule growth rates to physiological levels.
Nat Cell Biol, 15(6) 688-693 (2013)
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Miguel Coelho, Nicola Maghelli, Iva M. Tolic-Norrelykke
Single-molecule imaging in vivo: The dancing building blocks of the cell.
Integr Biol (Camb), 5(5) 748-758 (2013)
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Carsten Hoege, Anthony Hyman
Principles of PAR polarity in Caenorhabditis elegans embryos.
Nat Rev Mol Cell Biol, 14(5) 315-322 (2013)
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Hugo Bowne-Anderson^✳︎, Marija Zanic^✳︎, Monika Kauer, Jonathon Howard
Microtubule dynamic instability: a new model with coupled GTP hydrolysis and multistep catastrophe.
Bioessays, 35(5) 452-461 (2013)
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Zoltan Maliga, Magno Junqueira, Yusuke Toyoda, Andreas Ettinger, Felipe Mora-Bermúdez, Robin Klemm, Andrej Vasilj, E. Guhr, Itziar Ibarlucea-Benitez, Ina Poser, Enzio Bonifacio, Wieland B. Huttner, Andrej Shevchenko, Anthony Hyman
A genomic toolkit to investigate kinesin and myosin motor function in cells.
Nat Cell Biol, 15(3) 325-334 (2013)
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Radhakrishnan Nagarajan, Alex T. Kalinka, William R Hogan
Evidence of community structure in Biomedical Research Grant Collaborations.
J Biomed Inform, 46(1) 40-46 (2013)
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Nathan Goehring^#, Stephan W. Grill^#
Cell polarity: mechanochemical patterning.
Trends Cell Biol, 23(2) 72-80 (2013)
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Marco Nousch, Christian R. Eckmann
Translational Control in the Caenorhabditis elegans Germ Line.
Adv Exp Med Biol, 757 205-247 (2013)
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Felipe Mora-Bermúdez, Miguel Turrero García, Wieland B. Huttner
Stem cells: Neural stem cells in cerebral cortex development.
In: Neuroscience in the 21st Century : from basic to clinical. (Eds.) Donald W. Pfaff,New York,Springer (2013),137-159 Ch. 6
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A.M. Sykes, Wieland B. Huttner
Prominin-1 (CD133) and the cell biology of neural progenitors and their progeny.
In: Prominin-1 (CD133): New Insights on Stem and Cancer Stem Cell Biology. (Eds.) Denis Corbeil Advances in Experimental Medicine and Biology ; 777.,New York,Springer (2013),89-98 Ch. 6
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Iana M. Kalinina, Amitabha Nandi, Petrina Delivani, Mariola R. Chacón, Anna Klemm, Damien Ramunno-Johnson, Alexander Krull, Benjamin Lindner, Nenad Pavin, Iva M. Tolic-Norrelykke
Pivoting of microtubules around the spindle pole accelerates kinetochore capture.
Nat Cell Biol, 15(1) 82-87 (2013)
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Vineeth Surendranath, Mirko Theis, Bianca Habermann, Frank Buchholz
Designing efficient and specific endoribonuclease-prepared siRNAs.
Methods Mol Biol, 942 193-204 (2013)
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Vincent Fraisier, Amal Kasri, Stéphanie Miserey-Lenkei, Jean-Baptiste Sibarita, Deepak Nair, Adeline Mayeux, Sabine Bardin, Yusuke Toyoda, Ina Poser, Anton A Poznyakovskiy, Bruno Goud, Anthony Hyman, Ariane Dimitrov
C11ORF24 Is a Novel Type I Membrane Protein That Cycles between the Golgi Apparatus and the Plasma Membrane in Rab6-Positive Vesicles.
PLoS ONE, 8(12) Art. No. e82223 (2013)
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Monalisa Mishra, Elisabeth Knust
Analysis of the Drosophila compound eye with light and electron microscopy.
Methods Mol Biol, 935 161-182 (2013)
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2012

Jerome Gilleron, Anja Zeigerer, Giovanni Marsico, Thierry Galvez, Marino Zerial
[Key role of Rab5: from endosome biogenesis to liver metabolism].
Med Sci (Paris), 28(12) 1041-1044 (2012)
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Melek Asli Kayserili^✳︎, Dave T. Gerrard^✳︎, Pavel Tomancak^#, Alex T. Kalinka^#
An excess of gene expression divergence on the x chromosome in Drosophila embryos: implications for the faster-x hypothesis.
PLoS Genet, 8(12) Art. No. e1003200 (2012)
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Per Widlund, Marija Podolski, Simone Reber, Joshua Alper, Marko Storch, Anthony Hyman, Jonathon Howard, David N. Drechsel
One-step purification of assembly-competent tubulin from diverse eukaryotic sources.
Mol Biol Cell, 23(22) 4393-4401 (2012)
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Kristina Uzunova, Billy T Dye, Hannelore Schutz, Rene Ladurner, Georg Petzold, Yusuke Toyoda, Marc A Jarvis, Nicholas G Brown, Ina Poser, Maria Novatchkova, Karl Mechtler, Anthony A. Hyman, Holger Stark, Brenda A Schulman, Jan-Michael Peters
APC15 mediates CDC20 autoubiquitylation by APC/C(MCC) and disassembly of the mitotic checkpoint complex.
Nat Struct Mol Biol, 19(11) 1116-1123 (2012)
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Elwy Okaz, Orlando Argüello-Miranda, Aliona Bogdanova, P K Vinod, Jesse J. Lipp, Zuzana Markova, Ievgeniia Zagoriy, Bela Novak, Wolfgang Zachariae
Meiotic Prophase Requires Proteolysis of M Phase Regulators Mediated by the Meiosis-Specific APC/C(Ama1).
Cell, 151(3) 603-618 (2012)
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Thierry Galvez, Jerome Gilleron, Marino Zerial, Gregory A O'Sullivan
SnapShot: Mammalian Rab proteins in endocytic trafficking.
Cell, 151(1) Art. No. 234-234.e2. (2012)
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Michael Groessl, H Luksch, Angela Rösen-Wolff, Andrej Shevchenko, Marc Gentzel
Profiling of the human monocytic cell secretome by quantitative label-free mass spectrometry identifies stimulus-specific cytokines and proinflammatory proteins.
Proteomics, 12(18) 2833-2842 (2012)
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Monalisa Mishra, Michaela Rentsch, Elisabeth Knust
Crumbs regulates polarity and prevents light-induced degeneration of the simple eyes of Drosophila, the ocelli
Eur J Cell Biol, 91(9) 706-716 (2012)
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Martin Bergert, Stanley Dinesh Chandradoss, Ravi Desai, Ewa Paluch
Cell mechanics control rapid transitions between blebs and lamellipodia during migration.
Proc Natl Acad Sci U.S.A., 109(36) 14434-14439 (2012)
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James Sáenz, Erdinc Sezgin, Petra Schwille, Kai Simons
Functional convergence of hopanoids and sterols in membrane ordering.
Proc Natl Acad Sci U.S.A., 109(35) 14236-14240 (2012)
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Christian Schröter, Saul Ares^✳︎, Luis G. Morelli^✳︎, Alina Isakova, Korneel Hens, Daniele Soroldoni, Martin Gajewski, Frank Jülicher, Sebastian J Maerkl, Bart Deplancke, Andrew C. Oates
Topology and dynamics of the zebrafish segmentation clock core circuit
PLoS Biol, 10(7) Art. No. e1001364 (2012)
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Andrej Vasilj^✳︎, Marc Gentzel^✳︎, Elke Ueberham, Rolf Gebhardt, Andrej Shevchenko
Tissue proteomics by one-dimensional gel electrophoresis combined with label-free protein quantification
J Proteome Res, 11(7) 3680-3689 (2012)
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Volker Bormuth^✳︎, Bert Nitzsche^✳︎, Felix Ruhnow, Aniruddha Mitra, Marko Storch, Burkhard Rammner, Jonathon Howard, Stefan Diez
The highly processive kinesin-8, Kip3, switches microtubule protofilaments with a bias towards the left
Biophys J, 103(1 (Letter)) 4-6 (2012)
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Minna-Liisa Änkö^#, Karla M. Neugebauer^#
RNA-protein interactions in vivo: global gets specific
Trends Biochem Sci, 37(7) 255-262 (2012)
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Wilhelm Palm, Julio Sampaio, Marko Brankatschk, Maria Carvalho, Ali Mahmoud, Andrej Shevchenko, Suzanne Eaton
Lipoproteins in Drosophila melanogaster-Assembly, Function, and Influence on Tissue Lipid Composition
PLoS Genet, 8(7) Art. No. e1002828 (2012)
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Nicole Bieberstein^✳︎, Fernando Carrillo Oesterreich^✳︎, Korinna Straube, Karla M. Neugebauer
First exon length controls active chromatin signatures and transcription.
Cell Rep, 2(1) 62-68 (2012)
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Andreas Sagner, Matthias Merkel, Benoit Aigouy, Julia Gaebel, Marko Brankatschk, Frank Jülicher^#, Suzanne Eaton^#
Establishment of Global Patterns of Planar Polarity during Growth of the Drosophila Wing Epithelium.
Curr Biol, 22(14) 1296-1301 (2012)
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Maria Carvalho^✳︎, Julio Sampaio^✳︎, Wilhelm Palm, Marko Brankatschk, Suzanne Eaton^#, Andrej Shevchenko^#
Effects of diet and development on the Drosophila lipidome
Mol Syst Biol, 8 Art. No. 600 (2012)
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Julia Franziska Winter^✳︎, Sebastian Höpfner^✳︎, Kerstin Korn, Benjamin Farnung, Charles R. Bradshaw, Giovanni Marsico, Michael Volkmer, Bianca Habermann, Marino Zerial
Caenorhabditis elegans screen reveals role of PAR-5 in RAB-11-recycling endosome positioning and apicobasal cell polarity.
Nat Cell Biol, 14(7) 666-676 (2012)
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Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid, Jean-Yves Tinevez, Dan White, Volker Hartenstein, Kevin W Eliceiri, Pavel Tomancak^#, Albert Cardona^#
Fiji: an open-source platform for biological-image analysis.
Nat Methods, 9(7) 676-682 (2012)
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Ryuji Minasaki, Christian R. Eckmann
Subcellular specialization of multifaceted 3'end modifying nucleotidyltransferases.
Curr Opin Cell Biol, 24(3) 314-322 (2012)
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Mehdi Goudarzi, Torsten U Banisch, Mehrpouya B Mobin, Nicola Maghelli, Katsiaryna Tarbashevich, Ina Strate, Jana van den Berg, Heiko Blaser, Sabine Bandemer, Ewa Paluch, Jeroen Bakkers, Iva M. Tolic-Norrelykke, Erez Raz
Identification and Regulation of a Molecular Module for Bleb-Based Cell Motility.
Dev Cell, 23(1) 210-218 (2012)
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Katja Kapp^✳︎, Johannes Siemens^✳︎, Hans-Ulrich Häring, Reiner Lammers
Proteolytic processing of the protein tyrosine phosphatase α extracellular domain is mediated by ADAM17/TACE.
Eur J Cell Biol, 91(9) 687-693 (2012)
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Anja Zeigerer, Jerome Gilleron, Roman L Bogorad, Giovanni Marsico, Hidenori Nonaka, Sarah Seifert, Hila Epstein-Barash, Satya Kuchimanchi, Chang Geng Peng, Vera M Ruda, Perla Del Conte-Zerial, Jan G Hengstler, Yannis Kalaidzidis, Victor Koteliansky, Marino Zerial
Rab5 is necessary for the biogenesis of the endolysosomal system in vivo.
Nature, 485(7399) 465-470 (2012)
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Katharina Ross^✳︎, Anna Sedello^✳︎, Gabriele Putz Todd, Maciej Paszkowski-Rogacz, Alexander W. Bird, Li Ding, Tatyana Grinenko, Kira Behrens, Nina Hubner, Matthias Mann, Claudia Waskow, Carol Stocking, Frank Buchholz
Polycomb group ring finger 1 cooperates with Runx1 in regulating differentiation and self-renewal of hematopoietic cells.
Blood, 119(18) 4152-4161 (2012)
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Xinwang Cao, Michal Surma, Kai Simons
Polarized sorting and trafficking in epithelial cells
Cell Res, 22(5) 793-805 (2012)
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Nathan Goehring, Anthony A. Hyman
Organelle growth control through limiting pools of cytoplasmic components.
Curr Biol, 22(9) 330-339 (2012)
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Alex T. Kalinka^#, Pavel Tomancak^#
The evolution of early animal embryos: conservation or divergence?
Trends Ecol Evol, 27(7) 385-393 (2012)
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Lola Bajard, Andrew C. Oates
Breathe in and straighten your back: hypoxia, notch, and scoliosis
Cell, 149(2) 255-256 (2012)
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Cristina Aguirre-Portolés, Alexander W. Bird, Anthony A. Hyman, Marta Cañamero, Ignacio Pérez de Castro, Marcos Malumbres
Tpx2 controls spindle integrity, genome stability, and tumor development.
Cancer Res, 72(6) 1518-1528 (2012)
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Erdinc Sezgin, Ilya Levental, Michal Grzybek, Günter Schwarzmann, Veronika Mueller, Alf Honigmann, Vladimir N. Belov, Christian Eggeling, Uenal Coskun, Kai Simons, Petra Schwille
Partitioning, diffusion, and ligand binding of raft lipid analogs in model and cellular plasma membranes.
Biochim Biophys Acta, 1818(7) 1777-1784 (2012)
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Wilhelm Walter, Stefan Diez
Molecular motors: Myosin shifts into reverse gear
Nat Nanotechnol, 7(4 (News & Views)) 213-214 (2012)
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Li Ding, Ina Poser, Maciej Paszkowski-Rogacz, Frank Buchholz
From RNAi screens to molecular function in embryonic stem cells
Stem cell rev, 8(1) 32-42 (2012)
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Debojyoti Chakraborty, Dennis Kappei, Mirko Theis, Anja Nitzsche, Li Ding, Maciej Paszkowski-Rogacz, Vineeth Surendranath, Nicolas Berger, Herbert Schulz, Kathrin Saar, Norbert Hubner, Frank Buchholz
Combined RNAi and localization for functionally dissecting long non-coding RNAs
Nat Methods, 9(4) 360-362 (2012)
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Heiko Dückert, Verena Pries, Vivek Khedkar, Sascha Menninger, Hanna Bruss, Alexander W. Bird, Zoltan Maliga, Andreas Brockmeyer, Petra Janning, Anthony A. Hyman, Stefan Grimme, Markus Schürmann, Hans Preut, Katja Hübel, Slava Ziegler, Kamal Kumar, Herbert Waldmann
Natural product-inspired cascade synthesis yields modulators of centrosome integrity.
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Wilhelm Walter, Stefan Diez
Molecular motors: A staggering giant.
Nature, 482(7383) 44-45 (2012)
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Elena Taverna, Christiane Haffner, Rainer Pepperkok, Wieland B. Huttner
A new approach to manipulate the fate of single neural stem cells in tissue.
Nat Neurosci, 15(2) 329-337 (2012)
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Iva Kelava, Isabel Reillo, Ayako Y Murayama, Alex T. Kalinka, Denise Stenzel, Pavel Tomancak, Fumio Matsuzaki, Cécile Lebrand, Erika Sasaki, Jens C Schwamborn, Hideyuki Okano, Wieland B. Huttner, Víctor Borrell
Abundant occurrence of basal radial glia in the subventricular zone of embryonic neocortex of a lissencephalic primate, the common marmoset Callithrix jacchus.
Cereb Cortex, 22(2) 469-481 (2012)
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Sophie Ayciriex, Marina Le Guédard, Nadine Camougrand, Gisèle Velours, Mario Schoene, Sebastien Leone, Valerie Wattelet-Boyer, Jean-William Dupuy, Andrej Shevchenko, Jean-Marie Schmitter, René Lessire, Jean-Jacques Bessoule, Eric Testet
YPR139c/LOA1 encodes a novel lysophosphatidic acid acyltransferase associated with lipid droplets and involved in TAG homeostasis.
Mol Biol Cell, 23(2) 233-246 (2012)
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Albert Cardona, Stephan Saalfeld, Johannes Schindelin, Ignacio Arganda-Carreras, Stephan Preibisch, Mark Longair, Pavel Tomancak, Volker Hartenstein, Rodney J Douglas
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Martin P Stewart, Yusuke Toyoda, Anthony A. Hyman, Daniel J. Müller
Tracking mechanics and volume of globular cells with atomic force microscopy using a constant-height clamp.
Nat Protoc, 7(1) 143-154 (2012)
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Minna-Liisa Änkö, Michaela Müller-McNicoll, Holger Brandl, Tomaz Curk, Crtomir Gorup, Ian Henry, Jernej Ule, Karla M. Neugebauer
The RNA-binding landscapes of two SR proteins reveal unique functions and binding to diverse RNA classes.
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Aparna K Sapra, Fernando Carrillo Oesterreich, Marta Pabis, Imke Listerman, Nicole Bieberstein, Karla M. Neugebauer
Splicing Factor ChIP and ChRIP: Detection of splicing and splicing factors at genes by chromatin immunoprecipitation
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Mathias J. Gerl, Julio Sampaio, Lucie Kalvodova, Jean-Marc Verbavatz, Andrej Shevchenko, Cornelia Schroeder, Kai Simons
Quantitative analysis of the lipidomes of the influenza virus envelope and MDCK cell apical membrane
J Cell Biol, 196(2) 213-221 (2012)
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Luis M B B Estronca, Jorge Santos Da Silva, Julio Sampaio, Andrej Shevchenko, Paul Verkade, Alfin D N Vaz, Winchil Vaz, Otilia V Vieira
Molecular etiology of atherogenesis--in vitro induction of lipidosis in macrophages with a new LDL model
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Ronny Herzog, Kai Schuhmann, Dominik Schwudke, Julio Sampaio, Stefan R. Bornstein, Michael Schroeder, Andrej Shevchenko
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Michal Surma, Christian Klose, Kai Simons
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Carolina Tropini^✳︎, Elizabeth A Roth^✳︎, Marija Zanic, Melissa Gardner, Jonathon Howard
Islands containing slowly hydrolyzable GTP analogs promote microtubule rescues.
PLoS ONE, 7(1) Art. No. e30103 (2012)
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Tobias Pietzsch^✳︎, Stephan Preibisch^✳︎, Pavel Tomancak, Stephan Saalfeld
ImgLib2 – Generic Image Processing in Java
Bioinformatics, 28(22) 3009-3011 (2012)
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Cihan Erkut, Sider Penkov, Karim Fahmy, Teymuras V. Kurzchalia
How worms survive desiccation: Trehalose pro water.
Worm, 1(1) 61-65 (2012)
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Alexander W. Bird, Axel Erler, Jun Fu, Jean-Karim Hériché, Marcello Maresca, Youming Zhang, Anthony A. Hyman, A Francis Stewart
High-efficiency counterselection recombineering for site-directed mutagenesis in bacterial artificial chromosomes.
Nat Methods, 9(1) 103-109 (2012)
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Massimilano Scolz, Per Widlund, Silvano Piazza, Debora Rosa Bublik, Simone Reber, Leticia Y Peche, Yari Ciani, Nina Hubner, Mayumi Isokane, Martin Monte, Jan Ellenberg, Anthony Hyman, Claudio Schneider, Alexander W. Bird
GTSE1 is a microtubule plus-end tracking protein that regulates EB1-dependent cell migration.
PLoS ONE, 7(12) Art. No. e51259 (2012)
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Christian Klose, Michal Surma, Mathias J. Gerl, Felix Meyenhofer, Andrej Shevchenko, Kai Simons
Flexibility of a Eukaryotic Lipidome – Insights from Yeast Lipidomics
PLoS ONE, 7(4) Art. No. e35063 (2012)

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Michaela Wilsch-Bräuninger, Jula Peters, Judith Paridaen, Wieland B. Huttner
Basolateral rather than apical primary cilia on neuroepithelial cells committed to delamination.
Development, 139(1) 95-105 (2012)
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Aurelie Tomczak, Jana Sontheimer, David N. Drechsel, Rainer Hausdorf, Marc Gentzel, Andrej Shevchenko, Stefanie Eichler, Karim Fahmy, Frank Buchholz, Maria Teresa Pisabarro
3D profile-based approach to proteome-wide discovery of novel human chemokines
PLoS ONE, 7(5) Art. No. e36151 (2012)
DOI

2011

Simone Reber, Anthony A. Hyman
Samurai sword sets spindle size.
Cell, 147(6) 1224-1225 (2011)
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Hermann-Josef Kaiser, Michal Surma, Ilya Levental, Michal Grzybek, Robin W. Klemm, Daniel Lingwood, Kai Simons
Molecular convergence of bacterial and eukaryotic surface order.
J Biol Chem, 286(47) 40631-40637 (2011)
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Louis Leung^✳︎, Abigail Klopper^✳︎, Stephan W. Grill, William A Harris, Caren Norden
Apical migration of nuclei during G2 is a prerequisite for all nuclear motion in zebrafish neuroepithelia.
Development, 138(22) 5003-5013 (2011)
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Nathan Goehring, Philipp Khuc Trong, Justin Bois, Debanjan Chowdhury, Ernesto M Nicola, Anthony A. Hyman, Stephan W. Grill
Polarization of PAR Proteins by Advective Triggering of a Pattern-Forming System.
Science, 334(6059) 1137-1141 (2011)
DOI

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Marcus Braun, Zdenek Lansky, Gero Fink, Felix Ruhnow, Stefan Diez^#, Marcel E Janson^#
Adaptive braking by Ase1 prevents overlapping microtubules from sliding completely apart.
Nat Cell Biol, 13(10) 1259-1264 (2011)
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Till Korten, Bert Nitzsche, Christopher Gell, Felix Ruhnow, Cecile Leduc, Stefan Diez
Fluorescence imaging of single Kinesin motors on immobilized microtubules.
Methods Mol Biol, 783 121-137 (2011)
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Jakub Sedzinski^✳︎, Mate Biro^✳︎, Annelie Oswald, Jean-Yves Tinevez, Guillaume Salbreux, Ewa Paluch
Polar actomyosin contractility destabilizes the position of the cytokinetic furrow.
Nature, 476(7361) 462-466 (2011)
DOI

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Martin P Stewart, Yusuke Toyoda, Anthony A. Hyman, Daniel J. Müller
Force probing cell shape changes to molecular resolution.
Trends Biochem Sci, 36(8) 444-450 (2011)
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Jonathon Howard^#, Stephan W. Grill^#, Justin Bois^#
Turing's next steps: the mechanochemical basis of morphogenesis.
Nat Rev Mol Cell Biol, 12(6) 400-406 (2011)
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Nathan Goehring, Carsten Hoege, Stephan W. Grill^#, Anthony A. Hyman^#
PAR proteins diffuse freely across the anterior-posterior boundary in polarized C. elegans embryos.
J Cell Biol, 193(3) 583-594 (2011)
DOI

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Alex T. Kalinka, Pavel Tomancak
linkcomm: an R package for the generation, visualization, and analysis of link communities in networks of arbitrary size and type.
Bioinformatics, 27(14) 2011-2012 (2011)
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Lis Jakobsen, Katja Vanselow, Marie Skogs, Yusuke Toyoda, Emma Lundberg, Ina Poser, Lasse G Falkenby, Martin Bennetzen, Jens Westendorf, Erich A Nigg, Mathias Uhlen, Anthony A. Hyman, Jens S Andersen
Novel asymmetrically localizing components of human centrosomes identified by complementary proteomics methods.
EMBO J, 30(8) 1520-1535 (2011)
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Fernando Carrillo Oesterreich, Nicole Bieberstein, Karla M. Neugebauer
Pause locally, splice globally.
Trends Cell Biol, 21(6, SI) 328-335 (2011)
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Clifford Brangwynne, Timothy J. Mitchison, Anthony A. Hyman
Active liquid-like behavior of nucleoli determines their size and shape in Xenopus laevis oocytes.
Proc Natl Acad Sci U.S.A., 108(11) 4334-4339 (2011)
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Stefanie Redemann, Siegfried Schloissnig, Susanne Ernst, Andrei I. Pozniakovsky, Swathi Ayloo, Anthony A. Hyman, Henrik Bringmann
Codon adaptation-based control of protein expression in C. elegans.
Nat Methods, 8(3) 250-252 (2011)
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Per Widlund, Jeffrey H. Stear, Andrei I. Pozniakovsky, Marija Zanic, Simone Reber, Gary J. Brouhard, Anthony A. Hyman^#, Jonathon Howard^#
XMAP215 polymerase activity is built by combining multiple tubulin-binding TOG domains and a basic lattice-binding region.
Proc Natl Acad Sci U.S.A., 108(7) 2741-2746 (2011)
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Antonio Domingues, Karla M. Neugebauer, Robert Fern
Identification of four functional NR3B isoforms in developing white matter reveals unexpected diversity among glutamate receptors.
J Neurochem, 117(3) 449-460 (2011)
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Justin Bois, Frank Jülicher, Stephan W. Grill
Pattern formation in active fluids
Phys Rev Lett, 106(2) Art. No. 028103 (2011)
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Martin P Stewart, Jonne H. Helenius, Yusuke Toyoda, Subramanian Ramanathan, Daniel J. Müller, Anthony A. Hyman
Hydrostatic pressure and the actomyosin cortex drive mitotic cell rounding.
Nature, 469(7329) 226-230 (2011)
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Nicola Maghelli, Iva M. Tolic-Norrelykke
Laser ablation of the microtubule cytoskeleton: setting up and working with an ablation system.
Methods Mol Biol, 777 261-271 (2011)
PDF DOI

2010

Alex T. Kalinka^✳︎, Karolina M Varga^✳︎, Dave T. Gerrard, Stephan Preibisch, David L. Corcoran, Julia Jarrells, Uwe Ohler, Casey M. Bergman, Pavel Tomancak
Gene expression divergence recapitulates the developmental hourglass model.
Nature, 468(7325) 811-814 (2010)
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Sider Penkov^✳︎, Fanny Mende^✳︎, Vyacheslav Zagoriy, Cihan Erkut, René Martin, Ulrike Pässler, Kai Schuhmann, Dominik Schwudke, Margit Gruner, Jana Mäntler, Thomas Müller-Reichert, Andrej Shevchenko, Hans-Joachim Knölker, Teymuras V. Kurzchalia
Maradolipids: Diacyltrehalose Glycolipids Specific to Dauer Larva in Caenorhabditis elegans.
Angew Chem Int Ed Engl, 49(49) 9430-9435 (2010)
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Maria Carvalho, Dominik Schwudke, Julio Sampaio, Wilhelm Palm, Isabelle Riezman, Gautam Dey, Gagan D Gupta, Satyajit Mayor, Howard Riezman, Andrej Shevchenko, Teymuras V. Kurzchalia^#, Suzanne Eaton^#
Survival strategies of a sterol auxotroph.
Development, 137(21) 3675-3685 (2010)
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Nathan W. Goehring, Debanjan Chowdhury, Anthony A. Hyman, Stephan W. Grill
FRAP analysis of membrane-associated proteins: lateral diffusion and membrane-cytoplasmic exchange
Biophys J, 99(8) 2443-2452 (2010)
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Abigail Klopper^✳︎, Gabriel Krens^✳︎, Stephan W. Grill, Carl-Philipp Heisenberg
Finite-size corrections to scaling behavior in sorted cell aggregates.
Eur Phys J E Soft Matter, 33(2) 99-103 (2010)
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Martina Huranová, Ivan Ivani, Ales Benda, Ina Poser, Yehuda Brody, Martin Hof, Yaron Shav-Tal, Karla M. Neugebauer, David Stanĕk
The differential interaction of snRNPs with pre-mRNA reveals splicing kinetics in living cells.
J Cell Biol, 191(1) 75-86 (2010)
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Ilya Levental^✳︎, Daniel Lingwood, Michal Grzybek, Uenal Coskun, Kai Simons^✳︎
Palmitoylation regulates raft affinity for the majority of integral raft proteins
Proc Natl Acad Sci U.S.A., 107(51) 22050-22054 (2010)
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Rashmi Mishra, Michal Grzybek, Toshiro Niki, Mitsuomi Hirashima, Kai Simons
Galectin-9 trafficking regulates apical-basal polarity in Madin-Darby canine kidney epithelial cells
Proc Natl Acad Sci U.S.A., 107(41) 17633-17638 (2010)
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Mirjam Mayer, Martin Depken, Justin Bois, Frank Jülicher, Stephan W. Grill
Anisotropies in cortical tension reveal the physical basis of polarizing cortical flows.
Nature, 467(7315) 617-621 (2010)
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Cecile Leduc, Nenad Pavin, Frank Jülicher^#, Stefan Diez^#
Collective Behavior of Antagonistically Acting Kinesin-1 Motors
Phys Rev Lett, 105(12) Art. No. 128103 (2010)
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Benoit Aigouy, Reza Farhadifar, Douglas B Staple, Andreas Sagner, Jens-Christian Röper, Frank Jülicher, Suzanne Eaton
Cell flow reorients the axis of planar polarity in the wing epithelium of Drosophila.
Cell, 142(5) 773-786 (2010)
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Christian Klose, Christer S. Ejsing, Anna J. Garcia-Sáez, Hermann-Josef Kaiser, Julio Sampaio, Michal Surma, Andrej Shevchenko, Petra Schwille, Kai Simons
Yeast lipids can phase-separate into micrometer-scale membrane domains
J Biol Chem, 285(39) 30224-30232 (2010)
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Elena Taverna, Wieland B. Huttner
Neural progenitor nuclei IN motion.
Neuron, 67(6) 906-914 (2010)
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Jeremy N. Pulvers, Jaroslaw Bryk, Jennifer L. Fish, Michaela Wilsch-Bräuninger, Yoko Arai, Dora Schreier, Ronald Naumann, Jussi Helppi, Bianca Habermann, Johannes Vogt, Robert Nitsch, Attila Toth, Wolfgang Enard, Svante Pääbo, Wieland B. Huttner
Mutations in mouse Aspm (abnormal spindle-like microcephaly associated) cause not only microcephaly but also major defects in the germline.
Proc Natl Acad Sci U.S.A., 107(38) 16595-16600 (2010)
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Minna-Liisa Änkö, Karla M. Neugebauer
Long noncoding RNAs add another layer to pre-mRNA splicing regulation.
Mol Cell, 39(6) 833-834 (2010)
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Michael H A Schmitz, Michael Held, Veerle Janssens, James R A Hutchins, Otto Hudecz, Elitsa Ivanova, Jozef Goris, Laura Trinkle-Mulcahy, Angus I Lamond, Ina Poser, Anthony A. Hyman, Karl Mechtler, Jan-Michael Peters, Daniel W Gerlich
Live-cell imaging RNAi screen identifies PP2A-B55alpha and importin-beta1 as key mitotic exit regulators in human cells.
Nat Cell Biol, 12(9) 886-893 (2010)
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Till Korten, Alf Månsson, Stefan Diez
Towards the Application of Cytoskeletal Motor Proteins in Molecular Detection and Diagnostic Devices
Curr Opin Biotechnol, 21(4) 477-488 (2010)
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Stefanie Redemann^✳︎^#, Jacques Pecreaux^✳︎^#, Nathan W. Goehring, Khaled Khairy, Ernst H K Stelzer, Anthony A. Hyman^#, Jonathon Howard^#
Membrane invaginations reveal cortical sites that pull on mitotic spindles in one-cell C. elegans embryos.
PLoS ONE, 5(8) Art. No. e12301 (2010)
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Vyacheslav Zagoriy, Vitali Matyash, Teymuras V. Kurzchalia
Long-chain O-ascarosyl-alkanediols are constitutive components of Caenorhabditis elegans but do not induce dauer larva formation.
Chem Biodivers, 7(8) 2016-2022 (2010)
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Marko Brankatschk, Suzanne Eaton
Lipoprotein particles cross the blood-brain barrier in Drosophila.
J Neurosci, 30(31) 10441-10447 (2010)
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Ilya Levental, Michal Grzybek, Kai Simons
Greasing their way: lipid modifications determine protein association with membrane rafts
Biochemistry, 49(30) 6305-6316 (2010)
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Akin Akinc, William Querbes, Soma De, June Qin, Maria Frank-Kamenetsky, K Narayanannair Jayaprakash, Muthusamy Jayaraman, Kallanthottathil G Rajeev, William L Cantley, J Robert Dorkin, James S Butler, Liuliang Qin, Timothy Racie, Andrew Sprague, Eugenio Fava, Anja Zeigerer, Michael J Hope, Marino Zerial, Dinah W Y Sah, Kevin Fitzgerald, Mark A Tracy, Muthiah Manoharan, Victor Koteliansky, Antonin de Fougerolles, Martin A Maier
Targeted delivery of RNAi therapeutics with endogenous and exogenous ligand-based mechanisms.
Mol Ther, 18(7) 1357-1364 (2010)
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Carsten Hoege, Alexandru T. Constantinescu, Anne Schwager, Nathan W. Goehring, Prateek Kumar, Anthony A. Hyman
LGL can partition the cortex of one-cell Caenorhabditis elegans embryos into two domains.
Curr Biol, 20(14) 1296-1303 (2010)
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Daiki Umetsu, Christian Dahmann
Compartment boundaries: Sorting cells with tension.
Fly, 4(3) 241-245 (2010)
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Mikolaj Slabicki, Mirko Theis, Dragomir Krastev, Sergey Samsonov, Emeline Mundwiller, Magno Junqueira, Maciej Paszkowski-Rogacz, Joan Teyra, Anne-Kristin Heninger, Ina Poser, Fabienne Prieur, Jérémy Truchetto, Christian Confavreux, Cécilia Marelli, Alexandra Durr, Jean Philippe Camdessanche, Alexis Brice, Andrej Shevchenko, Maria Teresa Pisabarro, Giovanni Stevanin, Frank Buchholz
A genome-scale DNA repair RNAi screen identifies SPG48 as a novel gene associated with hereditary spastic paraplegia.
PLoS Biol, 8(6) Art. No. e1000408 (2010)
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Simone Fietz, Iva Kelava, Johannes Vogt, Michaela Wilsch-Bräuninger, Denise Stenzel, Jennifer L. Fish, Denis Corbeil, Axel Riehn, Wolfgang Distler, Robert Nitsch, Wieland B. Huttner
OSVZ progenitors of human and ferret neocortex are epithelial-like and expand by integrin signaling.
Nat Neurosci, 13(6) 690-699 (2010)
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Denis Corbeil, Anne-Marie Marzesco, Michaela Wilsch-Bräuninger, Wieland B. Huttner
The intriguing links between prominin-1 (CD133), cholesterol-based membrane microdomains, remodeling of apical plasma membrane protrusions, extracellular membrane particles, and (neuro)epithelial cell differentiation.
FEBS Lett, 584(9) 1659-1664 (2010)
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Nina C. Hubner^✳︎, Alexander W. Bird^✳︎, Jürgen Cox, Bianca Splettstoesser, Peter Bandilla, Ina Poser, Anthony A. Hyman^#, Matthias Mann^#
Quantitative proteomics combined with BAC TransgeneOmics reveals in vivo protein interactions.
J Cell Biol, 189(4) 739-754 (2010)
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Uenal Coskun, Kai Simons
Membrane rafting: from apical sorting to phase segregation.
FEBS Lett, 584(9) 1685-1693 (2010)
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Sven Vogel^✳︎, Nenad Pavin^✳︎, Nicola Maghelli, Frank Jülicher, Iva M. Tolic-Norrelykke
Microtubules and motor proteins: Mechanically regulated self-organization in vivo
Eur Phys J Spec Top, 178(1) 57-69 (2010)
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James R A Hutchins^✳︎, Yusuke Toyoda^✳︎, Björn Hegemann^✳︎, Ina Poser^✳︎, Jean-Karim Hériché, Martina M Sykora, Martina Augsburg, Otto Hudecz, Bettina A Buschhorn, Jutta Bulkescher, Christian Conrad, David Comartin, Alexander Schleiffer, Mihail Sarov, Andrei I. Pozniakovsky, Mikolaj Slabicki, Siegfried Schloissnig, Ines Steinmacher, Marit Leuschner, Andrea Ssykor, Steffen Lawo, Laurence Pelletier, Holger Stark, Kim Nasmyth, Jan Ellenberg, Richard Durbin, Frank Buchholz, Karl Mechtler, Anthony A. Hyman^#, Jan-Michael Peters^#
Systematic analysis of human protein complexes identifies chromosome segregation proteins.
Science, 328(5978) 593-599 (2010)
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Beate Neumann^✳︎, Thomas Walter^✳︎, Jean-Karim Hériché, Jutta Bulkescher, Holger Erfle, Christian Conrad, Phill Rogers, Ina Poser, Michael Held, Urban Liebel, Cihan Cetin, Frank Sieckmann, Gregoire Pau, Rolf Kabbe, Annelie Wünsche, Venkata Satagopam, Michael H A Schmitz, Catherine Chapuis, Daniel W Gerlich, Reinhard Schneider, Roland Eils, Wolfgang Huber, Jan-Michael Peters, Anthony A. Hyman, Richard Durbin, Rainer Pepperkok, Jan Ellenberg
Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes.
Nature, 464(7289) 721-727 (2010)
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Marc Lenoir, Uenal Coskun, Michal Grzybek, Xinwang Cao, Sabine Barbara Buschhorn, Jonathan James, Kai Simons, Michael Overduin
Structural basis of wedging the Golgi membrane by FAPP pleckstrin homology domains.
EMBO Rep, 11(4) 279-284 (2010)
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Abigail Klopper, Justin Bois, Stephan W. Grill
Influence of secondary structure on recovery from pauses during early stages of RNA transcription.
Phys Rev E, 81(3 Pt 1) Art. No. 030904 (2010)
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Claudio Collinet, Martin Stöter, Charles R. Bradshaw, Nikolay Samusik, Jochen Rink, Denise Kenski, Bianca Habermann, Frank Buchholz, Robert Henschel, Matthias S Mueller, Wolfgang E Nagel, Eugenio Fava, Yannis Kalaidzidis, Marino Zerial
Systems survey of endocytosis by multiparametric image analysis.
Nature, 464(7286) 243-249 (2010)
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Michael Stiess, Nicola Maghelli, Lukas C Kapitein, Susana Gomis-Rüth, Michaela Wilsch-Bräuninger, Casper C Hoogenraad, Iva M. Tolic-Norrelykke, Frank Bradke
Axon extension occurs independently of centrosomal microtubule nucleation.
Science, 327(5966) 704-707 (2010)
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Garrett Greenan, Clifford Brangwynne, Steffen Jaensch, Joebin Gharakhani, Frank Jülicher^#, Anthony A. Hyman^#
Centrosome size sets mitotic spindle length in Caenorhabditis elegans embryos.
Curr Biol, 20(4) 353-358 (2010)
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Bert Nitzsche, Volker Bormuth, Corina Bräuer, Jonathon Howard, Leonid Ionov, Jacob W. J. Kerssemakers, Till Korten, Cecile Leduc, Felix Ruhnow, Stefan Diez
Studying kinesin motors by optical 3D-nanometry in gliding motility assays.
Methods Cell Biol, 95 247-271 (2010)
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Denis Corbeil, Anne-Marie Marzesco, Christine A. Fargeas, Wieland B. Huttner
Prominin-1: a distinct cholesterol-binding membrane protein and the organisation of the apical plasma membrane of epithelial cells.
Subcell Biochem, 51 399-423 (2010)
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Christopher Gell, Volker Bormuth, Gary J. Brouhard, Daniel N. Cohen, Stefan Diez, Claire Friel, Jonne Helenius, Bert Nitzsche, Heike Petzold, Jan Ribbe, Erik Schäffer, Jeffrey H. Stear, Anastasiya Trushko, Vladimir Varga, Per Widlund, Marija Zanic, Jonathon Howard
Microtubule dynamics reconstituted in vitro and imaged by single-molecule fluorescence microscopy.
Methods Cell Biol, 95 221-245 (2010)
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Daniel Lingwood, Kai Simons
Lipid rafts as a membrane-organizing principle.
Science, 327(5961) 46-50 (2010)
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