| 2010 |
| Thomas Walter, David W Shattuck, Richard Baldock, Mark E Bastin, Anne E Carpenter, Suzanne Duce, Jan Ellenberg, Adam Fraser, Nicholas Hamilton, Steve Pieper, Mark A Ragan, Jurgen E Schneider, Pavel Tomancak & Jean-Karim Hériché |
| Visualization of image data from cells to organisms |
| Nat. Methods, Vol. 7, no. 3s, pp. 26-41, 2010 |
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| Christoph C. H. Langer, Radoslaw K. Ejsmont, Cornelia Schönbauer, Frank Schnorrer, Pavel Tomancak |
| In Vivo RNAi Rescue in Drosophila melanogaster with Genomic Transgenes from Drosophila pseudoobscura |
| PLoS ONE, Vol. 5, no. 1, pp. e8928-1-e8928-10, 2010 |
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| 2009 |
| A Cardona, S Saalfeld, P Tomancak, V Hartenstein |
| Drosophila Brain Development: Closing the Gap between a Macroarchitectural and Microarchitectural Approach |
| Cold Spring Harb Symp Quant Biol, Vol. 0, pp. DOI:10.1101/sqb.-2009.74.037, 2009 |
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| Elizabeth Rach, Hsiang-Yu Yuan, William Majoros, Pavel Tomancak, Uwe Ohler |
| Motif composition, conservation and condition-specificity of single and alternative transcription start sites in the Drosophila genome |
| Genome Biol., Vol. 10, no. 7, pp. R73.1-R73.24, 2009 |
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| Radoslaw K Ejsmont, Mihail Sarov, Sylke Winkler, Kamil A Lipinski, Pavel Tomancak |
| A toolkit for high-throughput, cross-species gene engineering in Drosophila |
| Nat. Methods, Vol. 6, no. 6, pp. 435-437, 2009 |
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| Stephan Saalfeld, Albert Cardona, Volker Hartenstein, Pavel Tomancak |
| CATMAID: Collaborative Annotation Toolkit for Massive Amounts of Image Data |
| Bioinformatics, Vol. 25, no. 15, pp. 1984-1986, 2009 |
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| Stephan Preibisch , Stephan Saalfeld, Pavel Tomancak |
| Globally Optimal Stitching of Tiled 3D Microscopic Image Acquisitions |
| Bioinformatics, Vol. 25, no. 11, pp. 1463-1465, 2009 |
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| Stephan Preibisch, Stephan Saalfeld, Torsten Rohlfing, Pavel Tomancak |
| Bead-based mosaicing of single plane illumination microscopy images using geometric local descriptor matching |
| Proceedings of SPIE, SPIE, Bellingham, no. 72592S, pp. 1-10, 2009 |
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| 2008 |
| Carlos Quijano, Pavel Tomancak, Jesus Lopez-Marti, Mikita Suyama, Peer Bork, Marco Milan, David Torrents, Miguel Manzanares |
| Selective maintenance of Drosophila tandemly arranged duplicated genes during evolution |
| Genome Biol., Vol. 9, no. 12, pp. R176.1-R176.11, 2008 |
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| S. Preibisch, R. Ejsmont, T. Rohlfing, P. Tomancak |
| Towards digital representation of Drosophila embryogenesis |
| 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, IEEE Service Center, Piscataway, pp. 324-327, 2008 |
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| Stephan Preibisch, Torsten Rohlfing, Michael P. Hasak, Pavel Tomancak |
| Mosaicing of Single Plane Illumination Microscopy Images Using Groupwise Registration and Fast Content-Based Image Fusion |
| Proceedings of SPIE Medical Imaging 2008: Image Processing, SPIE, Bellingham, Wash., pp. 69140E-1-69140E-8, 2008 |
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| Eric Lecuyer, Pavel Tomancak |
| Mapping the gene expression universe |
| Curr. Opin. Genet. Dev., Vol. 18, no. 6, pp. 506-512, 2008 |
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| 2007 |
| Eric Lecuyer, Hideki Yoshida, Neela Parthasarathy, Christina Alm, Tomas Babak, Tanja Cerovina, Timothy R. Hughes, Pavel Tomancak, Henry M. Krause |
| Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function |
| Cell, Vol. 131, no. 1, pp. 174-187, 2007 |
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| Tiago R. Magalhaes, Jessica Palmer, Pavel Tomancak, Katherine S. Pollard |
| Transcriptional control in embryonic Drosophila midline guidance assessed through a whole genome approach |
| BMC Neurosci, Vol. 8, no. 59, pp. 1-11, 2007 |
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| Pavel Tomancak, Benjamin Berman, Amy Beaton, Richard Weiszmann, Elaine Kwan, Volker Hartenstein, Susan Celniker, Gerald Rubin |
| Global analysis of patterns of gene expression during Drosophila embryogenesis |
| Genome Biol., Vol. 8, no. 7, pp. 145.1-145.34, 2007 |
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| 2005 |
| A Aziz Aboobaker, Pavel Tomancak, Nipam Patel, Gerald M Rubin, Eric C Lai |
| Drosophila microRNAs exhibit diverse spatial expression patterns during embryonic development |
| Proc. Natl. Acad. Sci. U.S.A., Vol. 102, no. 50, pp. 18017-18022, 2005 |
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| 2003 |
| Eric C Lai, Pavel Tomancak, Robert W Williams, Gerald M Rubin |
| Computational identification of Drosophila microRNA genes |
| Genome Biol., Vol. 4, no. 7, pp. R42-R42, 2003 |
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| 2002 |
| Pavel Tomancak, Amy Beaton, Richard Weiszmann, Elaine Kwan, ShengQiang Shu, Suzanna E Lewis, Stephen Richards, Michael Ashburner, Volker Hartenstein, Susan E Celniker, Gerald M Rubin |
| Systematic determination of patterns of gene expression during Drosophila embryogenesis |
| Genome Biol., Vol. 3, no. 12, pp. 0-0, 2002 |
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| Alan M Michelson |
| Deciphering genetic regulatory codes: a challenge for functional genomics |
| Proc. Natl. Acad. Sci. U.S.A., Vol. 99, no. 2, pp. 546-548, 2002 |
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| 2000 |
| P Tomancak, F Piano, V Riechmann, K C Gunsalus, K J Kemphues, A Ephrussi |
| A Drosophila melanogaster homologue of Caenorhabditis elegans par-1 acts at an early step in embryonic-axis formation |
| Nat. Cell. Biol., Vol. 2, no. 7, pp. 458-460, 2000 |
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| 1998 |
| M Muckenthaler, N Gunkel, D Frishman, A Cyrklaff, P Tomancak, M W Hentze |
| Iron-regulatory protein-1 (IRP-1) is highly conserved in two invertebrate species--characterization of IRP-1 homologues in Drosophila melanogaster and Caenorhabditis elegans |
| Eur. J. Biochem., Vol. 254, no. 2, pp. 230-237, 1998 |
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| P Tomancak, A Guichet, P Zavorszky, A Ephrussi |
| Oocyte polarity depends on regulation of gurken by Vasa |
| Development, Vol. 125, no. 9, pp. 1723-1732, 1998 |
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