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Pavel TomancakGroup Members
General Contact Information
Alex T. Kalinka post-doc Alex studies the mechanisms of evolution of gene expression during Drosophila embryonic development. Helena Jambor post-doc Helena is interested in understanding the impact of RNA localization on the development of Drosophila ovary. Tobias Pietszch post-doc Tobias has a strong background in computer vision and will apply his skills to segmentation and registration of SPIM recordings of Drosophila embryogenesis. Stephan Saalfeld PhD student Stephan uses approaches from computer vision to reconstruct and analyze massive serial section transmission electron microscopy acquisitions of Drosophila nervous system.
Kayserili, Melek Asli PhD student Asli is studying the divergence of embryogenesis processes in different Drosophila species using transgenesis and transcriptomics techniques. Vineeth Surendranath PhD student Vineeth studies the divergence of gene regulatory networks in evolution using informatic analysis of deep sequencing data. Maria Bogdanzaliewa technician Maria makes and characterizes genomic fosmid libraries in different Drosophila species.
Pavel Mejstrik technician Pavel screens for gene expression patterns in various tissues using high-throughput RNA in situ hybridization. Peter Pitrone technician Pete builds SPIM microscopes optimized for imaging Drosophila embryogenesis. Former lab membersStephan Preibisch Former PhD student Stephan developed the stitching and SPIM registration tools, contributed to Fiji, ImgLib and many micro-array related projects in our and other labs at the CBG. Currently he is working with Rob Singer and Gene Myers pendling between Janelia Farm and MPI-CBG, funded by HFSP
Radoslaw Ejsmont PhD student turned post-doc Radek developed tools for reverse genetic manipulation of genes within large genomic transgenes - FlyFos system.
He is currently doing a post-doc with Bassem Hassan funded by EMBO.
Karolina Varga (formerly Jaztrzebowska)
former PhD student
Karolina was working in our lab on he hourglass model of developmental evolution. She is currently in Oxford in the lab of Ilan Davis. Manonmani Arunachalan
former PhD student
Manonmani was working on sequence determinants of gene expression patterns. She continues this type of work at Duke University in the lab of Uwe Ohler. Michael Weber
former Master student
Michael was imaging patterns of gene expression during Drosophila embryogenesis using SPIM. He currently does his PhD in Jan Huisken's group at the MPI-CBG. Kamil Lipinski
former Hiwi
Kamil was working on the FlyFos libraries. He is currently doing his PhD at the ETH Zurich in the laboratory of Wilhelm Krek Radostina Shopova (formerly Izhakarowa)
former Master student
Radostina was developing a protocol for dual color fluorescent RNA in situ hybridization. |
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