| 2011 |
| Sokolowska, Monika; Czapinska, Honorata; Bochtler, Matthias |
| Hpy188I-DNA pre- and post-cleavage complexes--snapshots of the GIY-YIG nuclease mediated catalysis. |
| Nucleic Acids Res., 39, no. 4, pp. 1554-1564, (2011) |
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| Antonczak, Alicja K; Simova, Zuzana; Yonemoto, Isaac T; Bochtler, Matthias; Piasecka, Anna; Czapinska, Honorata; Brancale, Andrea; Tippmann, Eric M |
| Importance of single molecular determinants in the fidelity of expanded genetic codes. |
| Proc. Natl. Acad. Sci. U.S.A., 108, no. 4, pp. 1320-1325, (2011) |
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| Firczuk, Malgorzata; Wojciechowski, Marek; Czapinska, Honorata; Bochtler, Matthias |
| DNA intercalation without flipping in the specific ThaI-DNA complex. |
| Nucleic Acids Res., 39, no. 2, pp. 744-754, (2011) |
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| 2010 |
| Piano, Dario; Alaoui, Sabah El; Korza, Henryk J; Filipek, Renata; Sabala, Izabela; Haniewicz, Patrycja; Buechel, Claudia; Sanctis, Daniele De; Bochtler, Matthias |
| Crystallization of the photosystem II core complex and its chlorophyll binding subunit CP43 from transplastomic plants of Nicotiana tabacum. |
| Photosyn. Res., 106, no. 3, pp. 221-226, (2010) |
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| Chojnowski, Grzegorz; Bochtler, Matthias |
| DIBER: protein, DNA or both? |
| Acta Crystallogr. D Biol. Crystallogr., 66, no. Pt 6, pp. 643-653, (2010) |
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| Gentsch, Marcus; Kaczmarczyk, Aneta; Leeuwen, Karin van; Boer, Martin de; Kaus-Drobek, Magdalena; Dagher, Marie-Claire; Kaiser, Petra; Arkwright, Peter D; Gahr, Manfred; Rösen-Wolff, Angela; Bochtler, Matthias; Secord, Elizabeth; Britto-Williams, Pamela; Saifi, Gulam Mustafa; Maddalena, Anne; Dbaibo, Ghassan; Bustamante, Jacinta; Casanova, Jean-Laurent; Roos, Dirk; Roesler, Joachim |
| Alu-repeat-induced deletions within the NCF2 gene causing p67-phox-deficient chronic granulomatous disease (CGD). |
| Hum. Mutat., 31, no. 2, pp. 151-158, (2010) |
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| Chojnowski, Grzegorz; Breer, Katarzyna; Narczyk, Marta; Wielgus-Kutrowska, Beata; Czapinska, Honorata; Hashimoto, Mariko; Hikishima, Sadao; Yokomatsu, Tsutomu; Bochtler, Matthias; Girstun, Agnieszka; Staron, Krzysztof; Bzowska, Agnieszka |
| 1.45 A resolution crystal structure of recombinant PNP in complex with a pM multisubstrate analogue inhibitor bearing one feature of the postulated transition state. |
| Biochem. Biophys. Res. Commun., 391, no. 1, pp. 703-708, (2010) |
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| 2009 |
| Sokolowska, Monika; Czapinska, Honorata; Bochtler, Matthias |
| Crystal structure of the beta beta alpha-Me type II restriction endonuclease Hpy99I with target DNA. |
| Nucleic Acids Res., 37, no. 11, pp. 3799-3810, (2009) |
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| 2008 |
| Tamulaitis, Gintautas; Zaremba, Mindaugas; Szczepanowski, Roman H; Bochtler, Matthias; Siksnys, Virginijus |
| How PspGI, catalytic domain of EcoRII and Ecl18kI acquire specificities for different DNA targets. |
| Nucleic Acids Res., 36, no. 19, pp. 6101-6108, (2008) |
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| Szczepanowski, Roman H; Carpenter, Michael A; Czapinska, Honorata; Zaremba, Mindaugas; Tamulaitis, Gintautas; Siksnys, Virginijus; Bhagwat, Ashok S.; Bochtler, Matthias |
| Central base pair flipping and discrimination by PspGI. |
| Nucleic Acids Res., 36, no. 19, pp. 6109-6117, (2008) |
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| Sukackaite, Rasa; Grazulis, Saulius; Bochtler, Matthias; Siksnys, Virginijus |
| The recognition domain of the BpuJI restriction endonuclease in complex with cognate DNA at 1.3-A resolution. |
| J. Mol. Biol., 378, no. 5, pp. 1084-1093, (2008) |
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| Lipka, Magdalena; Filipek, Renata; Bochtler, Matthias |
| Crystal structure and mechanism of the Staphylococcus cohnii virginiamycin B lyase (Vgb). |
| Biochemistry, 47, no. 14, pp. 4257-4265, (2008) |
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| Breer, Katarzyna; Wielgus-Kutrowska, Beata; Hashimoto, Mariko; Hikishima, Sadao; Yokomatsu, Tsutomu; Szczepanowski, Roman H; Bochtler, Matthias; Girstun, Agnieszka; Staron, Krzysztof; Bzowska, Agnieszka |
| Thermodynamic studies of interactions of calf spleen PNP with acyclic phosphonate inhibitors. |
| Nucleic Acids Symp Ser (Oxf), no. 52, pp. 663-664, (2008) |
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| 2007 |
| Firczuk, Malgorzata; Bochtler, Matthias |
| Folds and activities of peptidoglycan amidases. |
| FEMS Microbiol. Rev., 31, no. 6, pp. 676-691, (2007) |
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| Sokolowska, Monika; Kaus-Drobek, Magdalena; Czapinska, Honorata; Tamulaitis, Gintautas; Siksnys, Virginijus; Bochtler, Matthias |
| Restriction endonucleases that resemble a component of the bacterial DNA repair machinery. |
| Cell. Mol. Life Sci., 64, no. 18, pp. 2351-2357, (2007) |
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| Chojnowski, Grzegorz; Bochtler, Matthias |
| The statistics of the highest E value. |
| Acta Crystallogr., A, Found. Crystallogr., 63, no. Pt 4, pp. 297-305, (2007) |
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| Sokolowska, Monika; Kaus-Drobek, Magdalena; Czapinska, Honorata; Tamulaitis, Gintautas; Szczepanowski, Roman H; Urbanke, Claus; Siksnys, Virginijus; Bochtler, Matthias |
| Monomeric restriction endonuclease BcnI in the apo form and in an asymmetric complex with target DNA. |
| J. Mol. Biol., 369, no. 3, pp. 722-734, (2007) |
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| Bochtler, Matthias; Chojnowski, Grzegorz |
| The highest reflection intensity in a resolution shell. |
| Acta Crystallogr., A, Found. Crystallogr., 63, no. Pt 2, pp. 146-155, (2007) |
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| Kaus-Drobek, Magdalena; Czapinska, Honorata; Sokolowska, Monika; Tamulaitis, Gintautas; Szczepanowski, Roman H; Urbanke, Claus; Siksnys, Virginijus; Bochtler, Matthias |
| Restriction endonuclease MvaI is a monomer that recognizes its target sequence asymmetrically. |
| Nucleic Acids Res., 35, no. 6, pp. 2035-2046, (2007) |
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| Tamulaitis, Gintautas; Zaremba, Mindaugas; Szczepanowski, Roman H; Bochtler, Matthias; Siksnys, Virginijus |
| Nucleotide flipping by restriction enzymes analyzed by 2-aminopurine steady-state fluorescence. |
| Nucleic Acids Res., 35, no. 14, pp. 4792-4799, (2007) |
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| Firczuk, Malgorzata; Bochtler, Matthias |
| Mutational analysis of peptidoglycan amidase MepA. |
| Biochemistry, 46, no. 1, pp. 120-128, (2007) |
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| 2006 |
| Bochtler, Matthias; Szczepanowski, Roman H; Tamulaitis, Gintautas; Grazulis, Saulius; Czapinska, Honorata; Manakova, Elena; Siksnys, Virginijus |
| Nucleotide flips determine the specificity of the Ecl18kI restriction endonuclease. |
| EMBO J., 25, no. 10, pp. 2219-2229, (2006) |
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| 2005 |
| Korza, Henryk J; Bochtler, Matthias |
| Pseudomonas aeruginosa LD-carboxypeptidase, a serine peptidase with a Ser-His-Glu triad and a nucleophilic elbow. |
| J. Biol. Chem., 280, no. 49, pp. 40802-40812, (2005) |
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| Firczuk, Malgorzata; Mucha, Artur; Bochtler, Matthias |
| Crystal structures of active LytM. |
| J. Mol. Biol., 354, no. 3, pp. 578-590, (2005) |
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| Odintsov, Sergey G; Sabala, Izabela; Bourenkov, Gleb; Rybin, Vladimir; Bochtler, Matthias |
| Substrate access to the active sites in aminopeptidase T, a representative of a new metallopeptidase clan. |
| J. Mol. Biol., 354, no. 2, pp. 403-412, (2005) |
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| Grazulis, Saulius; Manakova, Elena; Roessle, Manfred; Bochtler, Matthias; Tamulaitiene, Giedre; Huber, Robert; Siksnys, Virginijus |
| Structure of the metal-independent restriction enzyme BfiI reveals fusion of a specific DNA-binding domain with a nonspecific nuclease. |
| Proc. Natl. Acad. Sci. U.S.A., 102, no. 44, pp. 15797-15802, (2005) |
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| Odintsov, Sergey G; Sabala, Izabela; Bourenkov, Gleb; Rybin, Vladimir; Bochtler, Matthias |
| Staphylococcus aureus aminopeptidase S is a founding member of a new peptidase clan. |
| J. Biol. Chem., 280, no. 30, pp. 27792-27799, (2005) |
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| Szczepanowski, Roman H; Filipek, Renata; Bochtler, Matthias |
| Crystal structure of a fragment of mouse ubiquitin-activating enzyme. |
| J. Biol. Chem., 280, no. 23, pp. 22006-22011, (2005) |
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| Azim, M Kamran; Goehring, Walter; Song, Hyun Kyu; Ramachandran, Ravishankar; Bochtler, Matthias; Goettig, Peter |
| Characterization of the HslU chaperone affinity for HslV protease. |
| Protein Sci., 14, no. 5, pp. 1357-1362, (2005) |
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| Dandanell, Gert; Szczepanowski, Roman H; Kierdaszuk, Borys; Shugar, David; Bochtler, Matthias |
| Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene. |
| J. Mol. Biol., 348, no. 1, pp. 113-125, (2005) |
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| Filipek, Renata; Potempa, Jan; Bochtler, Matthias |
| A comparison of staphostatin B with standard mechanism serine protease inhibitors. |
| J. Biol. Chem., 280, no. 15, pp. 14669-14674, (2005) |
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| Groll, Michael; Bochtler, Matthias; Brandstetter, Hans; Clausen, Tim; Huber, Robert |
| Molecular machines for protein degradation. |
| Chembiochem, 6, no. 2, pp. 222-256, (2005) |
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| 2004 |
| Filipek, Renata; Szczepanowski, Roman H; Sabat, Artur; Potempa, Jan; Bochtler, Matthias |
| Prostaphopain B structure: a comparison of proregion-mediated and staphostatin-mediated protease inhibition. |
| Biochemistry, 43, no. 44, pp. 14306-14315, (2004) |
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| Marcyjaniak, Malgorzata; Odintsov, Sergey G; Sabala, Izabela; Bochtler, Matthias |
| Peptidoglycan amidase MepA is a LAS metallopeptidase. |
| J. Biol. Chem., 279, no. 42, pp. 43982-43989, (2004) |
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| Bochtler, Matthias; Odintsov, Sergey G; Marcyjaniak, Malgorzata; Sabala, Izabela |
| Similar active sites in lysostaphins and D-Ala-D-Ala metallopeptidases. |
| Protein Sci., 13, no. 4, pp. 854-861, (2004) |
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| Odintsov, Sergey G; Sabala, Izabela; Marcyjaniak, Malgorzata; Bochtler, Matthias |
| Latent LytM at 1.3A resolution. |
| J. Mol. Biol., 335, no. 3, pp. 775-785, (2004) |
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| 2003 |
| Dubin, Grzegorz; Krajewski, Marcin; Popowicz, Grzegorz; Stec-Niemczyk, Justyna; Bochtler, Matthias; Potempa, Jan; Dubin, Adam; Holak, Tad A |
| A novel class of cysteine protease inhibitors: solution structure of staphostatin A from Staphylococcus aureus. |
| Biochemistry, 42, no. 46, pp. 13449-13456, (2003) |
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| Filipek, Renata; Rzychon, Malgorzata; Oleksy, Aneta; Gruca, Milosz; Dubin, Adam; Potempa, Jan; Bochtler, Matthias |
| The Staphostatin-staphopain complex: a forward binding inhibitor in complex with its target cysteine protease. |
| J. Biol. Chem., 278, no. 42, pp. 40959-40966, (2003) |
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| Rzychon, Malgorzata; Filipek, Renata; Sabat, Artur; Kosowska, Klaudia; Dubin, Adam; Potempa, Jan; Bochtler, Matthias |
| Staphostatins resemble lipocalins, not cystatins in fold. |
| Protein Sci., 12, no. 10, pp. 2252-2256, (2003) |
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| Song, Hyun Kyu; Bochtler, Matthias; Azim, M Kamran; Hartmann, Claudia; Huber, Robert; Ramachandran, Ravishankar |
| Isolation and characterization of the prokaryotic proteasome homolog HslVU (ClpQY) from Thermotoga maritima and the crystal structure of HslV. |
| Biophys. Chem., 100, no. 1-3, pp. 437-452, (2003) |
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| 2002 |
| Ramachandran, Ravishankar; Hartmann, Claudia; Song, Hyun Kyu; Huber, Robert; Bochtler, Matthias |
| Functional interactions of HslV (ClpQ) with the ATPase HslU (ClpY). |
| Proc. Natl. Acad. Sci. U.S.A., 99, no. 11, pp. 7396-7401, (2002) |
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| 2001 |
| Bochtler, Matthias; Song, Hyun Kyu; Hartmann, Claudia; Ramachandran, Ravishankar; Huber, Robert |
| The quaternary arrangement of HslU and HslV in a cocrystal: a response to Wang, Yale. |
| J. Struct. Biol., 135, no. 3, pp. 281-293, (2001) |
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| 2000 |
| Song, Hyun Kyu; Hartmann, Claudia; Ramachandran, Ravishankar; Bochtler, Matthias; Behrendt, Raymond; Moroder, Luis; Huber, Robert |
| Mutational studies on HslU and its docking mode with HslV. |
| Proc. Natl. Acad. Sci. U.S.A., 97, no. 26, pp. 14103-14108, (2000) |
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