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Marino Zerial

Publications

2009
Yonathan Lissanu Deribe, Philipp Wild, Akhila Chandrashaker, Jasna Curak, Mirko H H Schmidt, Yannis Kalaidzidis, Natasa Milutinovic, Irina Kratchmarova, Lukas Buerkle, Michael J Fetchko, Philipp Schmidt, Saranya Kittanakom, Kevin R Brown, Igor Jurisica, Blagoy Blagoev, Marino Zerial, Igor Stagljar, Ivan Dikic
Regulation of epidermal growth factor receptor trafficking by lysine deacetylase HDAC6
Sci Signal, Vol. 2, no. 102, pp. 0-0, 2009
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Dirk Helbing, Andreas Deutsch, Stefan Diez, Karsten Peters, Yannis Kalaidzidis, Kathrin Padberg-Gehle, Stefan Lämmer, Anders Johansson, Georg Breier, Frank Schulze, Marino Zerial
Biologistics and the struggle for efficiency: concepts and perspectives
Advances in Complex Systems, Vol. 12, no. 6, pp. 533-548, 2009
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Claudio Collinet
System survey of endocytosis by functional genomics and quantitative multi-parametric image analysis (Phd-Thesis)
2009
Charles Richard Bradshaw
Improving the analysis of genome-wide screens through the detection of weakly conserved domains (Phd-thesis)
2009
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Takeshi Ohya, Marta Miaczynska, Ünal Coskun, Barbara Lommer, Anja Runge, David Drechsel, Yannis Kalaidzidis, Marino Zerial
Reconstitution of Rab- and SNARE-dependent membrane fusion by synthetic endosomes
Nature, Vol. 459, no. 7250, pp. 1091-1097, 2009
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Jesper B. Bramsen, Maria B. Laursen, Anne F. Nielsen, Thomas B. Hansen, Claus Bus, Niels Langkjær, B. Ravindra Babu, Torben Højland, Mikhail Abramov, Arthur Van Aerschot, Dalibor Odadzic, Romualdas Smicius, Jens Haas, Cordula Andree, Jharna Barman, Malgorzata Wenska, Puneet Srivastava, Chuanzheng Zhou, Dmytro Honcharenko, Simone Hess, Elke Müller, Georgii V. Bobkov, Sergey N. Mikhailov, Eugenio Fava, Thomas F. Meyer, Jyoti Chattopadhyaya, Marino Zerial, Joachim W. Engels, Piet Herdewijn, Jesper Wengel, Jørgen Kjems
A large-scale chemical modification screen identifies design rules to generate siRNAs with high activity, high stability and low toxicity
Nucleic Acids Res., Vol. 37, no. 9, pp. 2867-2881, 2009
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2008
Julia Franziska Winter
Genome-wide analysis of membrane trafficking in polarised epithelial cells in the C. elegans intestine (Phd-thesis)
2008
Anton A Poznyakovskiy, Thomas Zahnert, Yannis Kalaidzidis, Rolf Schmidt, Björn Fischer, Johannes Baumgart, Yury M Yarin
The creation of geometric three-dimensional models of the inner ear based on micro computer tomography data
Hearing Res., Vol. 243, no. 1-2, pp. 95-104, 2008
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Annette Schenck, Livia Goto-Silva, Claudio Collinet, Muriel Rhinn, Angelika Giner, Bianca Habermann, Michael Brand, Marino Zerial
The endosomal protein Appl1 mediates Akt substrate specificity and cell survival in vertebrate development
Cell, Vol. 133, no. 3, pp. 486-497, 2008
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Marisa P McShane, Marino Zerial
Survival of the weakest: signaling aided by endosomes
J. Cell Biol., Vol. 182, no. 5, pp. 823-825, 2008
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Perla Del Conte-Zerial, Lutz Brusch, Jochen C Rink, Claudio Collinet, Yannis Kalaidzidis, Marino Zerial, Andreas Deutsch
Membrane identity and GTPase cascades regulated by toggle and cut-out switches
Mol. Syst. Biol., Vol. 4, pp. 206-1-206-9, 2008
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Arun Pal, Fedor Severin, Sebastian Höpfner, Marino Zerial
Regulation of endosome dynamics by Rab5 and Huntingtin-HAP40 effector complex in physiological versus pathological conditions
Methods Enzymol., Elsevier Acad. Press, Amsterdam, pp. 239-257, 2008
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2007
Anna Kicheva, Periklis Pantazis, Tobias Bollenbach, Yannis Kalaidzidis, Thomas Bittig, Frank Juelicher, Marcos González-Gaitán
Kinetics of Morphogen Gradient Formation
Science, Vol. 315, no. 5811, pp. 521-525, 2007
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Torben Lessmann, Michele G. Leuenberger, Sascha Menninger, Meritxell Lopez-Canet, Oliver Muller, Stefan Hummer, Jenny Bormann, Kerstin Korn, Eugenio Fava, Marino Zerial, Thomas U. Mayer, Herbert Waldmann
Natural product-derived modulators of cell cycle progression and viral entry by enantioselective oxa Diels-Alder reactions on the solid phase
Chem Biol, Vol. 14, no. 4, pp. 443-451, 2007
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2006
Arun Pal, Fedor Severin, Barbara Lommer, Anna Shevchenko, Marino Zerial
Huntingtin-HAP40 complex is a novel Rab5 effector that regulates early endosome motility and is up-regulated in Huntington's disease
J. Cell Biol., Vol. 172, no. 4, pp. 605-618, 2006
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2005
Eberhard Krauß, Lucas Pelkmans, Eugenio Fava, Michael Hannus, Claudia Möbius, Kerstin Korn, Francoise Halley, Annett Lohmann, Hannes Grabner, Marino Zerial
Genomweite funktionelle Analyse des Kinoms mittels RNA-Interfernz
BIOspektrum, Vol. 11, no. SH, pp. 518-520, 2005
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Sebastian Höpfner
Modulation of Cargo Transport and Sorting through Endosome Motility and Positioning (Phd-thesis)
2005
Jochen Rink, Eric Ghigo, Yannis Kalaidzidis, Marino Zerial
Rab conversion as a mechanism of progression from early to late endosomes.
Cell, Vol. 122, no. 5, pp. 735-749, 2005
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Lucas Pelkmans, Marino Zerial
Kinase-regulated quantal assemblies and kiss-and-run recycling of caveolae.
Nature, Vol. 436, no. 7047, pp. 128-133, 2005
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Sally Martin, Kim Driessen, Susan J Nixon, Marino Zerial, Robert G Parton
Regulated localization of Rab18 to lipid droplets: Effects of lipolytic stimulation and inhibition of lipid droplet catabolism
J. Biol. Chem., Vol. 280, no. 51, pp. 42325-42335, 2005
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Gaetane Mace, Marta Miaczynska, Marino Zerial, Angel R Nebreda
Phosphorylation of EEA1 by p38 MAP kinase regulates mu opioid receptor endocytosis.
EMBO J., Vol. 24, no. 18, pp. 3235-3246, 2005
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Hye-Won Shin, Mitsuko Hayashi, Savvas Christoforidis, Sandra Lacas-Gervais, Sebastian Hoepfner, Markus R Wenk, Jan Modregger, Sandrine Uttenweiler-Joseph, Matthias Wilm, Arne Nystuen, Wayne N Frankel, Michele Solimena, Pietro De Camilli, Marino Zerial
An enzymatic cascade of Rab5 effectors regulates phosphoinositide turnover in the endocytic pathway.
J. Cell Biol., Vol. 170, no. 4, pp. 607-618, 2005
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Sebastian Hoepfner, Fedor Severin, Alicia Cabezas, Bianca Habermann, Anja Runge, David Gillooly, Harald Stenmark, Marino Zerial
Modulation of receptor recycling and degradation by the endosomal kinesin KIF16B.
Cell, Vol. 121, no. 3, pp. 437-450, 2005
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Lucas Pelkmans, Eugenio Fava, Hannes Grabner, Michael Hannus, Bianca Habermann, Eberhard Krausz, Marino Zerial
Genome-wide analysis of human kinases in clathrin- and caveolae/raft-mediated endocytosis.
Nature, Vol. 436, no. 7047, pp. 78-86, 2005
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2004
Carsten Schnatwinkel, Savvas Christoforidis, Margaret R Lindsay, Sandrine Uttenweiler-Joseph, Matthias Wilm, Robert G Parton, Marino Zerial
The Rab5 effector Rabankyrin-5 regulates and coordinates different endocytic mechanisms
PLoS Biol, Vol. 2, no. 9, pp. 1363-1380, 2004
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Lucas Pelkmans, Thomas Burli, Marino Zerial, Ari Helenius
Caveolin-stabilized membrane domains as multifunctional transport and sorting devices in endocytic membrane traffic.
Cell, Vol. 118, no. 6, pp. 767-780, 2004
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Marta Miaczynska, Lucas Pelkmans, Marino Zerial
Not just a sink: endosomes in control of signal transduction
Curr. Opin. Cell Biol., Vol. 16, no. 4, pp. 400-406, 2004
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Marta Miaczynska, Savvas Christoforidis, Angelika Giner, Anna Shevchenko, Sandrine Uttenweiler-Joseph, Bianca Habermann, Matthias Wilm, Robert G Parton, Marino Zerial
APPL proteins link Rab5 to nuclear signal transduction via an endosomal compartment
Cell, Vol. 116, no. 3, pp. 445-456, 2004
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2003
Tiina Lehto, Marta Miaczynska, Marino Zerial, Daniel J Muller, Fedor Severin
Observing the growth of individual actin filaments in cell extracts by time-lapse atomic force microscopy
FEBS Lett., Vol. 551, no. 1-3, pp. 25-28, 2003
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Stephane Gasman, Yannis Kalaidzidis, Marino Zerial
RhoD regulates endosome dynamics through Diaphanous-related Formin and Src tyrosine kinase.
Nat. Cell. Biol., Vol. 5, no. 3, pp. 195-204, 2003
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Rafael Mattera, Cecilia N Arighi, Robert Lodge, Marino Zerial, Juan S Bonifacino
Divalent interaction of the GGAs with the Rabaptin-5-Rabex-5 complex.
EMBO J., Vol. 22, no. 1, pp. 78-88, 2003
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2002
James T. Murray, Christina Panaretou, Harald Stenmark, Marta Miaczynska, Jonathan M. Backer
Role of Rab5 in the recruitment of hVps34/p150 to the early endosome
Traffic, Vol. 3, no. 6, pp. 416-427, 2002
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Ekaterini Panopoulou, David J. Gillooly, Jeffrey L. Wrana, Marino Zerial, Harald Stenmark, Carol Murphy, Theodore Fotsis
Early endosomal regulation of Smad-dependent signaling in endothelial cells.
J. Biol. Chem., Vol. 277, no. 20, pp. 18046-18052, 2002
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Stefano de Renzis, Birte Sonnichsen, Marino Zerial
Divalent Rab effectors regulate the sub-compartmental organization and sorting of early endosomes.
Nat. Cell. Biol., Vol. 4, no. 2, pp. 124-133, 2002
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Marta Miaczynska, Marino Zerial
Mosaic organization of the endocytic pathway.
Exp Cell Res., Vol. 272, no. 1, pp. 8-14, 2002
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2001
H. Stenmark, M. Zerial
Molecular mechanisms of membrane fusion in the endocytic pathway
Endocytosis, Oxford University Press, Oxford, pp. 94-110, 2001
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R Lippe, H Horiuchi, A Runge, M Zerial
Expression, purification, and characterization of Rab5 effector complex, rabaptin-5/rabex-5
Methods Enzymol., Elsevier, Amsterdam, pp. 132-145, 2001
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H Esters, K Alexandrov, A Iakovenko, T Ivanova, N Thoma, V Rybin, M Zerial, A J Scheidig, R S Goody
Vps9, Rabex-5 and DSS4: proteins with weak but distinct nucleotide-exchange activities for Rab proteins.
J. Mol. Biol., Vol. 310, no. 1, pp. 141-156, 2001
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T Van de Putte, A Zwijsen, O Lonnoy, V Rybin, M Cozijnsen, A Francis, V Baekelandt, C A Kozak, M Zerial, D Huylebroeck
Mice with a homozygous gene trap vector insertion in mgcRacGAP die during pre-implantation development.
Mech. Dev., Vol. 102, no. 1-2, pp. 33-44, 2001
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S Uttenweiler-Joseph, G Neubauer, S Christoforidis, M Zerial, M Wilm
Automated de novo sequencing of proteins using the differential scanning technique.
Proteomics, Vol. 1, no. 5, pp. 668-682, 2001
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S Christoforidis, M Zerial
Purification of EEA1 from bovine brain cytosol using Rab5 affinity chromatography and activity assays
Methods Enzymol., Elsevier, Amsterdam, pp. 120-132, 2001
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C Murphy, R Saffrich, J C Olivo-Marin, A Giner, W Ansorge, T Fotsis, M Zerial
Dual function of rhoD in vesicular movement and cell motility.
Eur. J. Cell Biol., Vol. 80, no. 6, pp. 391-398, 2001
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M Zerial, H McBride
Rab proteins as membrane organizers.
Nat. Rev. Mol. Cell. Biol., Vol. 2, no. 2, pp. 107-117, 2001
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E Nielsen, F Severin, A A Hyman, M Zerial
In vitro reconstitution of endosome motility along microtubules
Methods Mol Biol., Humana Press, Totowa, pp. 133-146, 2001
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Kai Simons, Marino Zerial
Traffic of Proteins and Compartmentalization of Eukaryotic Cells
Frontiers of Life, Volume II - Cells and Organisms, Academic Press, Oxford, Chapt. 3, 2001
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R Lippe, M Miaczynska, V Rybin, A Runge, M Zerial
Functional synergy between Rab5 effector Rabaptin-5 and exchange factor Rabex-5 when physically associated in a complex.
Mol. Biol. Cell, Vol. 12, no. 7, pp. 2219-2228, 2001
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2000
S Lehtonen, A Ora, V M Olkkonen, L Geng, M Zerial, S Somlo, E Lehtonen
In vivo interaction of the adapter protein CD2-associated protein with the type 2 polycystic kidney disease protein, polycystin-2.
J. Biol. Chem., Vol. 275, no. 42, pp. 32888-32893, 2000
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L Lanzetti, V Rybin, M G Malabarba, S Christoforidis, G Scita, M Zerial, P P Di Fiore
The Eps8 protein coordinates EGF receptor signalling through Rac and trafficking through Rab5.
Nature, Vol. 408, no. 6810, pp. 374-377, 2000
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B Sönnichsen, S De Renzis, E Nielsen, J Rietdorf, M Zerial
Distinct membrane domains on endosomes in the recycling pathway visualized by multicolor imaging of Rab4, Rab5, and Rab11
J. Cell Biol., Vol. 149, no. 4, pp. 901-914, 2000
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M Rubino, M Miaczynska, R Lippe, M Zerial
Selective membrane recruitment of EEA1 suggests a role in directional transport of clathrin-coated vesicles to early endosomes.
J. Biol. Chem., Vol. 275, no. 6, pp. 3745-3748, 2000
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S Christoforidis, M Zerial
Purification and identification of novel Rab effectors using affinity chromatography.
Methods, Vol. 20, no. 4, pp. 403-410, 2000
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E Nielsen, S Christoforidis, S Uttenweiler-Joseph, M Miaczynska, F Dewitte, M Wilm, B Hoflack, M Zerial
Rabenosyn-5, a novel Rab5 effector, is complexed with hVPS45 and recruited to endosomes through a FYVE finger domain.
J. Cell Biol., Vol. 151, no. 3, pp. 601-612, 2000
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1999
H M McBride, V Rybin, C Murphy, A Giner, R Teasdale, M Zerial
Oligomeric complexes link Rab5 effectors with NSF and drive membrane fusion via interactions between EEA1 and syntaxin 13.
Cell, Vol. 98, no. 3, pp. 377-386, 1999
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S Christoforidis, M Miaczynska, K Ashman, M Wilm, L Zhao, S C Yip, M D Waterfield, J M Backer, M Zerial
Phosphatidylinositol-3-OH kinases are Rab5 effectors.
Nat. Cell. Biol., Vol. 1, no. 4, pp. 249-252, 1999
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J Mulholland, J Konopka, B Singer-Kruger, M Zerial, D Botstein
Visualization of receptor-mediated endocytosis in yeast.
Mol. Biol. Cell, Vol. 10, no. 3, pp. 799-817, 1999
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S Christoforidis, H M McBride, R D Burgoyne, M Zerial
The Rab5 effector EEA1 is a core component of endosome docking.
Nature, Vol. 397, no. 6720, pp. 621-625, 1999
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E Nielsen, F Severin, J M Backer, A A Hyman, M Zerial
Rab5 regulates motility of early endosomes on microtubules
Nat. Cell. Biol., Vol. 1, no. 6, pp. 376-382, 1999
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1998
Marino Zerial
Membranes and sorting
Curr. Opin. Cell Biol., Vol. 10, pp. 475-476, 1998
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Harald Stenmark, Marino Zerial
Stock Preparation of Recombinant Vaccinia Virus
Cell Biology: A Laboratory Handbook, 2nd Edition, Vol. 1, Academic Press, Amsterdam, The Netherlands, Chapt. Viruses, pp. 540-543, 1998
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Harald Stenmark, Marino Zerial
Transient Expression Using the T7 RNA Polymerase Recombinant Vaccinia Virus System
Cell Biology: A Laboratory Handbook, 2nd Edition, Vol. 4, Academic Press, Amsterdam, The Netherlands, Chapt. 14/B, pp. 201-203, 1998
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Harald Stenmark, Marino Zerial
Lipofection
Cell Biology: A Laboratory Handbook, 2nd Edition, Vol. 4, Academic Press, Amsterdam, Netherlands, Chapt. 13/E, pp. 141-144, 1998
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S Lehtonen, V M Olkkonen, M Stapleton, M Zerial, E Lehtonen
HMG-17, a chromosomal non-histone protein, shows developmental regulation during organogenesis.
Int. J. Dev. Biol., Vol. 42, no. 6, pp. 775-782, 1998
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A Simonsen, R Lippe, S Christoforidis, J M Gaullier, A Brech, J Callaghan, B H Toh, C Murphy, M Zerial, H Stenmark
EEA1 links PI(3)K function to Rab5 regulation of endosome fusion.
Nature, Vol. 394, no. 6692, pp. 494-498, 1998
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G Vitale, V Rybin, S Christoforidis, P Thornqvist, M McCaffrey, H Stenmark, M Zerial
Distinct Rab-binding domains mediate the interaction of Rabaptin-5 with GTP-bound Rab4 and Rab5.
EMBO J., Vol. 17, no. 7, pp. 1941-1951, 1998
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H Gournier, H Stenmark, V Rybin, R Lippe, M Zerial
Two distinct effectors of the small GTPase Rab5 cooperate in endocytic membrane fusion.
EMBO J., Vol. 17, no. 7, pp. 1930-1940, 1998
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P Zacchi, H Stenmark, R G Parton, D Orioli, F Lim, A Giner, I Mellman, M Zerial, C Murphy
Rab17 regulates membrane trafficking through apical recycling endosomes in polarized epithelial cells.
J. Cell Biol., Vol. 140, no. 5, pp. 1039-1053, 1998
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