Citation overview from Google Scholar.
| 2011 |
| Kelava, Iva; Reillo, Isabel; Murayama, Ayako Y; Kalinka, Alex T.; Stenzel, Denise; Tomancak, Pavel; Matsuzaki, Fumio; Lebrand, Cécile; Sasaki, Erika; Schwamborn, Jens C; Okano, Hideyuki; Huttner, Wieland B.; Borrell, VÃctor |
| Abundant Occurrence of Basal Radial Glia in the Subventricular Zone of Embryonic Neocortex of a Lissencephalic Primate, the Common Marmoset Callithrix jacchus. |
| Cereb. Cortex, pp. 1-1, (2011) |
| Download PDF |
| Jambor, Helena; Brunel, Christine; Ephrussi, Anne |
| Dimerization of oskar 3' UTRs promotes hitchhiking for RNA localization in the Drosophila oocyte. |
| RNA, pp. 1-1, (2011) |
| Download PDF |
| Uddin, Mohammad Shorif; Lee, Hwee Kuan; Preibisch, Stephan W.; Tomancak, Pavel |
| Restoration of Uneven Illumination in Light Sheet Microscopy Images. |
| Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada, pp. 1-7, (2011) |
| Download PDF |
| Lipinski, Kamil A; Puchta, Olga; Surandranath, Vineeth; Kudla, Marek; Golik, Pawel |
| Revisiting the Yeast PPR Proteins - Application of an Iterative Hidden Markov Model Algorithm Reveals New Members of the Rapidly Evolving Family. |
| Molecular biology and evolution, pp. 1-1, (2011) |
| Download PDF |
| Kalinka, Alex T.; Tomancak, Pavel |
| linkcomm: an R package for the generation, visualization, and analysis of link communities in networks of arbitrary size and type. |
| Bioinformatics, pp. 1-1, (2011) |
| Download PDFDownload Supplementary Text File |
| Preibisch, Stephan W. |
| Reconstruction of Multi-Tile Microscopic Acquisitions |
| [Doctoral Thesis] Technische Universität Dresden, (2011) |
| Ejsmont, Radoslaw K; Ahlfeld, Peter; Pozniakovsky, Andrei I.; Stewart, A Francis; Tomancak, Pavel; Sarov, Mihail |
| Recombination-mediated genetic engineering of large genomic DNA transgenes. |
| Methods Mol. Biol., 772, pp. 445-458, (2011) |
| Download PDF |
| Ejsmont, Radoslaw K; Bogdanzaliewa, Maria; Lipinski, Kamil A; Tomancak, Pavel |
| Production of fosmid genomic libraries optimized for liquid culture recombineering and cross-species transgenesis. |
| Methods Mol. Biol., 772, pp. 423-443, (2011) |
| Download PDF |
| Ejsmont, Radoslaw K |
| A toolkit for visualization of patterns of gene expression in live Drosophila embryos |
| [Doctoral Thesis] Technische Universität Dresden, (2011) |
| 2010 |
| Kalinka, Alex T.; Varga, Karolina M.; Gerrard, Dave T.; Preibisch, Stephan W.; Corcoran, David L.; Jarrels, Julia; Ohler, Uwe; Bergman, Casey M.; Tomancák, Pavel |
| Gene expression divergence recapitulates the developmental hourglass model |
| Nature, 468, no. 7325, pp. 811-814, (2010) |
| Download PDFDownload Supplementary Text File |
| Oesterreich, Fernando Carrillo; Preibisch, Stephan W.; Neugebauer, Karla M. |
| Global analysis of nascent RNA reveals transcriptional pausing in terminal exons. |
| Mol. Cell, 40, no. 4, pp. 571-581, (2010) |
| Download PDF |
| Oteiza, Pablo; Köppen, Mathias; Krieg, Michael; Pulgar, Eduardo; Farias, Cecilia; Melo, Cristina; Preibisch, Stephan W.; Müller, Daniel J. ; Tada, Masazumi; Hartel, Steffen; Heisenberg, Carl-Philipp; Concha, Miguel L |
| Planar cell polarity signalling regulates cell adhesion properties in progenitors of the zebrafish laterality organ. |
| Development, 137, no. 20, pp. 3459-3468, (2010) |
| Download PDF |
| Cardona, Albert; Saalfeld, Stephan; Preibisch, Stephan W.; Schmid, Benjamin; Cheng, Anchi; Pulokas, Jim; Tomancák, Pavel; Hartenstein, Volker |
| An integrated micro- and macroarchitectural analysis of the Drosophila brain by computer-assisted serial section electron microscopy. |
| PLoS Biol., 8, no. 10, pp. 1000502-1000502, (2010) |
| Download PDF |
| Capek, Richard Karel; Weber, Michael; Eychmüller, Alexander |
| Alternative Incorporation Procedure of Quantum Dots in Polymer Microspheres |
| Chem Mater, 22, no. 17, pp. 4912-4918, (2010) |
| Reynaud, Emmanuel G.; Tomancák, Pavel |
| Meeting report: First light sheet based fluorescence microscopy workshop. |
| Biotechnol J, 5, no. 8, pp. 798-804, (2010) |
| Download PDF |
| Arunachalam, Manonmani; Jayasurya, Karthik; Tomancák, Pavel; Ohler, Uwe |
| An alignment-free method to identify candidate orthologous enhancers in multiple Drosophila genomes. |
| Bioinformatics, 26, no. 17, pp. 2109-2115, (2010) |
| Download PDF |
| Saalfeld, Stephan; Cardona, Albert; Hartenstein, Volker; Tomancák, Pavel |
| As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets |
| Bioinformatics, 26, no. 12, pp. 57-63, (2010) |
| Download PDF |
| Cardona, Albert; Saalfeld, Stephan; Arganda, Ignacio; Pereanu, Wayne; Schindelin, Johannes; Hartenstein, Volker |
| Identifying neuronal lineages of Drosophila by sequence analysis of axon tracts. |
| J. Neurosci., 30, no. 22, pp. 7538-7553, (2010) |
| Download PDF |
| Preibisch, Stephan W.; Saalfeld, Stephan; Schindelin, Johannes; Tomancák, Pavel |
| Software for bead-based registration of selective plane illumination microscopy data |
| Nat. Methods, 7, no. 6, pp. 418-419, (2010) |
| Download PDFDownload Supplementary Text FileDownload Supplementary Video FileDownload Supplementary Video FileDownload Supplementary Video FileDownload Supplementary Video FileDownload Supplementary Video FileDownload Supplementary Video File |
| Tomancák, Pavel; Ohler, Uwe |
| Mapping the complexity of transcription control in higher eukaryotes |
| Genome Biol., 11, no. 4, pp. 115-115, (2010) |
| Download PDF |
| Walter, Thomas; Shattuck, David W; Baldock, Richard; Bastin, Mark E; Carpenter, Anne E; Duce, Suzanna; Ellenberg, Jan; Fraser, Adam; Hamilton, Nicholas; Pieper, Steve; Ragan, Mark A; Schneider, Jurgen E; Tomancák, Pavel; Hériché, Jean-Karim |
| Visualization of image data from cells to organisms |
| Nat. Methods, 7, no. 3s, pp. 26-41, (2010) |
| Download PDF |
| Weber, Michael |
| Interspecimen registration of long-term, time-lapse selective plane illumination microscopy recordings of Drosophila melanogaster embryogenesis |
| [Diploma Thesis] Technische Universität Dresden, (2010) |
| Langer, Christoph C. H.; Ejsmont, Radoslaw K; Schönbauer, Cornelia; Schnorrer, Frank; Tomancák, Pavel |
| In Vivo RNAi Rescue in Drosophila melanogaster with Genomic Transgenes from Drosophila pseudoobscura |
| PLoS ONE, 5, no. 1, pp. 8928-8928, (2010) |
| Download PDF |
| Preibisch, Stephan W.; Tomancák, Pavel; Saalfeld, Stephan |
| Into ImgLib - Generic Image Processing in Java |
| [Conference Paper] ImageJ User and Developer Conference, Luxembourg, (2010) |
| Download PDF |
| Jastrzebowska, Karolina |
| Evolution of gene expression regulation during embryonic development of Drosophila species |
| [Doctoral Thesis] Technische Universität Dresden, (2010) |
| 2009 |
| Cardona, Albert; Saalfeld, Stephan; Tomancák, Pavel; Hartenstein, Volker |
| Drosophila Brain Development: Closing the Gap between a Macroarchitectural and Microarchitectural Approach. |
| Cold Spring Harb. Symp. Quant. Biol., 74, pp. 1-1, (2009) |
| Download PDF |
| Saalfeld, Stephan; Cardona, Albert; Hartenstein, Volker; Tomancák, Pavel |
| CATMAID: collaborative annotation toolkit for massive amounts of image data. |
| Bioinformatics, 25, no. 15, pp. 1984-1986, (2009) |
| Download PDF |
| Preibisch, Stephan W.; Saalfeld, Stephan; Tomancák, Pavel |
| Globally optimal stitching of tiled 3D microscopic image acquisitions. |
| Bioinformatics, 25, no. 11, pp. 1463-1465, (2009) |
| Download PDF |
| Ejsmont, Radoslaw K; Sarov, Mihail; Winkler, Sylke; Lipinski, Kamil A; Tomancák, Pavel |
| A toolkit for high-throughput, cross-species gene engineering in Drosophila. |
| Nat. Methods, 6, no. 6, pp. 435-437, (2009) |
| Download PDF |
| Rach, Elizabeth; Yuan, Hsiang-Yu; Majoros, William H; Tomancák, Pavel; Ohler, Uwe |
| Motif composition, conservation and condition-specificity of single and alternative transcription start sites in the Drosophila genome. |
| Genome Biol., 10, no. 7, pp. 73-73, (2009) |
| Download PDF |
| Arunachalam, Manonmani |
| Computational discovery of Cis-regulatory elements in multiple Drosophila species |
| [Doctoral Thesis] Technische Universität Dresden, (2009) |
| Preibisch, Stephan W.; Saalfeld, Stephan; Rohlfing, Torsten; Tomancák, Pavel |
| Bead-based mosaicing of single plane illumination microscopy images using geometric local descriptor matching |
| [Conference Paper] SPIE Medical Imaging Conference, Lake Buena Vista, Fla., (2009) |
| Download PDF |
| 2008 |
| Lécuyer, Eric; Tomancák, Pavel |
| Mapping the gene expression universe. |
| Curr. Opin. Genet. Dev., 18, no. 6, pp. 506-512, (2008) |
| Download PDF |
| Preibisch, Stephan W.; Ejsmont, Radoslaw K; Rohlfing, Torsten; Tomancák, Pavel |
| Towards digital representation of Drosophila embryogenesis |
| [Conference Paper] IEEE International Symposium on Biomedical Imaging : from Nano to Macro ; 5, Paris, (2008) |
| Download PDF |
| Quijano, Carlos; Tomancák, Pavel; Lopez-Marti, Jesus; Suyama, Mikita; Bork, Peer; Milan, Marco; Torrents, David; Manzanares, Miguel |
| Selective maintenance of Drosophila tandemly arranged duplicated genes during evolution. |
| Genome Biol., 9, no. 12, pp. 176-176, (2008) |
| Download PDF |
| Preibisch, Stephan W.; Rohlfing, Torsten; Hasak, Michael P.; Tomancák, Pavel |
| Mosaicing of Single Plane Illumination Microscopy Images Using Groupwise Registration and Fast Content-Based Image Fusion |
| [Conference Paper] Medical Imaging Symposium, San Diego, Calif., (2008) |
| Download PDF |
| Preibisch, Stephan W.; Saalfeld, Stephan; Tomancák, Pavel |
| Fast stitching of large 3d biological datasets |
| [Conference Paper] ImageJ User and Developer Conference, Luxembourg, (2008) |
| Download PDF |
| Saalfeld, Stephan; Tomancák, Pavel |
| Automatic landmark correspondence detection for ImageJ |
| [Conference Paper] ImageJ User and Developer Conference, Luxembourg, (2008) |
| Download PDF |
| 2007 |
| Lécuyer, Eric; Yoshida, Hiroyuki; Parthasarathy, Neela; Alm, Christina; Babak, Tomas; Cerovina, Tanja; Hughes, Timothy R; Tomancák, Pavel; Krause, Henry M |
| Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function. |
| Cell, 131, no. 1, pp. 174-187, (2007) |
| Download PDF |
| Magalhães, Tiago R; Palmer, Jessica; Tomancák, Pavel; Pollard, Katherine S |
| Transcriptional control in embryonic Drosophila midline guidance assessed through a whole genome approach. |
| BMC neuroscience, 8, pp. 59-59, (2007) |
| Download PDF |
| Berman, Benjamin P; Tomancák, Pavel; Beaton, Amy; Weiszmann, Richard; Kwan, Elaine; Hartenstein, Volker; Celniker, Susan E; Rubin, Gerald M |
| Global analysis of patterns of gene expression during Drosophila embryogenesis. |
| Genome Biol., 8, no. 7, pp. 145-145, (2007) |
| Download PDF |
| 2005 |
| Aboobaker, A. Aziz; Tomancák, Pavel; Patel, Nipam; Rubin, Gerald M; Lai, Eric C. |
| Drosophila microRNAs exhibit diverse spatial expression patterns during embryonic development. |
| Proc. Natl. Acad. Sci. U.S.A., 102, no. 50, pp. 18017-18022, (2005) |
| Download PDF |
| 2003 |
| Lai, Eric C.; Tomancák, Pavel; Williams, Robert W; Rubin, Gerald M |
| Computational identification of Drosophila microRNA genes. |
| Genome Biol., 4, no. 7, pp. 42-42, (2003) |
| Download PDF |
| 2002 |
| Tomancák, Pavel; Beaton, Amy; Weiszmann, Richard; Kwan, Elaine; Shu, ShengQiang; Lewis, Suzanna E; Richards, Stephen; Ashburner, Michael; Hartenstein, Volker; Celniker, Susan E; Rubin, Gerald M |
| Systematic determination of patterns of gene expression during Drosophila embryogenesis. |
| Genome Biol., 3, no. 12, pp. 88-88, (2002) |
| Download PDF |
| Berman, Benjamin P; Tomancák, Pavel; Nibu, Yutaka; Pfeiffer, Barret D; Celniker, Susan E; Levine, Michael; Rubin, Gerald M; Eisen, Michael B |
| Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome. |
| Proc. Natl. Acad. Sci. U.S.A., 99, no. 2, pp. 757-762, (2002) |
| Download PDF |
| 2000 |
| Tomancák, Pavel; Piano, Fabio; Riechmann, Veit; Gunsalus, Kristin C.; Kemphues, Kenneth J.; Ephrussi, Anne |
| A Drosophila melanogaster homologue of Caenorhabditis elegans par-1 acts at an early step in embryonic-axis formation. |
| Nat. Cell Biol., 2, no. 7, pp. 458-460, (2000) |
| Download PDF |
| 1998 |
| Muckenthaler, Martina; Gunkel, Niki; Frishman, Dmitrij; Cyrklaff, Anna; Tomancák, Pavel; Hentze, Matthias W. |
| Iron-regulatory protein-1 (IRP-1) is highly conserved in two invertebrate species--characterization of IRP-1 homologues in Drosophila melanogaster and Caenorhabditis elegans. |
| Eur. J. Biochem., 254, no. 2, pp. 230-237, (1998) |
| Download PDF |
| Tomancák, Pavel; Guichet, Antoine; Zavorszky, Peter; Ephrussi, Anne |
| Oocyte polarity depends on regulation of gurken by Vasa. |
| Development, 125, no. 9, pp. 1723-1732, (1998) |
| Download PDF |
RSS feed from SCOPUS
Citation report from Scopus based on 26 articles. Generated in December 2010.
|
|
