Bioinformatics

The Bioinformatics Facility provides high-profile bioinformatics support to advance biological research. We develop custom-based bioinformatics tools and provide an integrated bioinformatics-tools platform for non-expert users.

Typical Service Requests:

1. Sequence Analysis

Protein sequence analysis & functional prediction
DNA/RNA sequence analysis
Multiple sequence alignment

2. Evolutionary Analysis

Phylogenetic tree construction
Orthologue/Paralogue searching

3. Structural Analysis

Protein structure prediction
RNA secondary structure prediction

4. High Throughput Data Analysis

Next generation sequencing analysis (ChIP-Seq, CLiP-Seq, RNA-Seq)
Custom microarray design assistance
Identification of potential gene candidates for HT screening
Annotation of screening hit-lists

5. Custom Code Development

Scripting and small tools (made available through our local Galaxy Server)
Data mining and workflow management using KNIME
Java plugin development for bioinformatics workbenches such as Geneious/CLC
Custom algorithm development upon request

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Bioinformatics services contact Bioinformatics The Bioinformatics Facility provides high-profile bioinformatics support to advance biological research. We develop custom-based bioinformatics tools and provide an integrated bioinformatics-tools platform for non-expert users. Typical Service Requests: 1. Sequence Analysis Protein sequence analysis & functional prediction DNA/RNA sequence analysis Multiple sequence alignment 2. Evolutionary Analysis Phylogenetic tree construction Orthologue/Paralogue searching 3. Structural Analysis Protein structure prediction RNA secondary structure prediction 4. High Throughput Data Analysis Next generation sequencing analysis (ChIP-Seq, CLiP-Seq, RNA-Seq) Custom microarray design assistance Identification of potential gene candidates for HT screening Annotation of screening hit-lists 5. Custom Code Development Scripting and small tools (made available through our local Galaxy Server) Data mining and workflow management using KNIME Java plugin development for bioinformatics workbenches such as Geneious/CLC Custom algorithm development upon request
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